Synthesis, antimicrobial activity, density functional modelling and molecular docking with COVID-19 main protease studies of benzoxazole derivative: 2-(p-chloro-benzyl)-5-[3-(4-ethly-1-piperazynl) propionamido]-benzoxazole

被引:13
作者
Zeyrek, Celal Tugrul [1 ]
Arpaci, Ozlem Temiz [2 ]
Arisoy, Mustafa [2 ]
Onurdag, Fatma Kaynak [3 ]
机构
[1] Turkish Energy Nucl & Min Res Instut, Dept Acad & Publicat, TR-06100 Ankara, Turkey
[2] Ankara Univ, Dept Pharmaceut Chem, Fac Pharm, TR-06100 Ankara, Turkey
[3] Trakya Univ, Dept Pharmaceut Microbiol, Fac Pharm, TR-22030 Edirne, Turkey
关键词
Benzoxazoles; Density functional theory; Dpectroscopy; Molecular docking; Covid-19;
D O I
10.1016/j.molstruc.2021.130413
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
This study contains synthesis, antimicrobial activity, density functional modelling and molecular dock-ing studies of benzoxazole derivative: 2-(p-chloro-benzyl)-5-[3-(4-ethly-1-piperazynl) propionamido]-benzoxazole. The synthetic procedure of investigated compound is given in detail. The newly synthesized benzoxazole compound and standard drugs were evaluated for their antimicrobial activity against some Gram-positive, Gram-negative bacteria and fungus C. albicans and their drug-resistant isolates. The ben-zoxazole compound has been characterized by using H-1-NMR, IR and MASS spectrometry and elemental analysis techniques. The molecular structure of the compound in the ground state has been modelling using density functional theory (DFT) with B3LYP/6-311 ++ g(d,p) level. The molecular docking of 2-(p-chloro-benzyl)-5-[3-(4-ethly-1-piperazynl) propionamido]-benzoxazole with COVID-19 main protease has been also performed by using optimized geometry and the experimentally determined dimensional struc-ture of the main protease (M-pro) of COVID-19. (C) 2021 Elsevier B.V. All rights reserved.
引用
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页数:10
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