New kinase regulation mechanism found in HipBA: a bacterial persistence switch

被引:15
作者
Evdokimov, Artem [1 ]
Voznesensky, Igor [1 ]
Fennell, Kimberly [1 ]
Anderson, Marie [1 ]
Smith, James F. [1 ]
Fisher, Douglas A. [1 ]
机构
[1] Pfizer Inc, Groton, CT 06340 USA
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 2009年 / 65卷
关键词
HEAVY-ATOM DERIVATIVES; ESCHERICHIA-COLI K-12; QUICK-SOAK METHOD; MULTIDRUG TOLERANCE; AFFECTS LETHALITY; AFFECTS FREQUENCY; MUREIN SYNTHESIS; DNA-SYNTHESIS; MODEL; INHIBITION;
D O I
10.1107/S0907444909018800
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Bacterial persistence is the ability of individual cells to randomly enter a period of dormancy during which the cells are protected against antibiotics. In Escherichia coli, persistence is regulated by the activity of a protein kinase HipA and its DNA-binding partner HipB, which is a strong inhibitor of both HipA activity and hip operon transcription. The crystal structure of the HipBA complex was solved by application of the SAD technique to a mercury derivative. In this article, the fortuitous and interesting effect of mercury soaks on the native HipBA crystals is discussed as well as the intriguing tryptophan-binding pocket found on the HipA surface. A HipA-regulation model is also proposed that is consistent with the available structural and biochemical data.
引用
收藏
页码:875 / 879
页数:5
相关论文
共 21 条
[1]   Methods used in the structure determination of bovine mitochondrial F-1 ATPase [J].
Abrahams, JP ;
Leslie, AGW .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1996, 52 :30-42
[2]   AUTOREGULATION OF HIP, AN OPERON THAT AFFECTS LETHALITY DUE TO INHIBITION OF PEPTIDOGLYCAN OR DNA-SYNTHESIS [J].
BLACK, DS ;
IRWIN, B ;
MOYED, HS .
JOURNAL OF BACTERIOLOGY, 1994, 176 (13) :4081-4091
[3]   STRUCTURE AND ORGANIZATION OF HIP, AN OPERON THAT AFFECTS LETHALITY DUE TO INHIBITION OF PEPTIDOGLYCAN OR DNA-SYNTHESIS [J].
BLACK, DS ;
KELLY, AJ ;
MARDIS, MJ ;
MOYED, HS .
JOURNAL OF BACTERIOLOGY, 1991, 173 (18) :5732-5739
[4]   A dose-response study of antibiotic resistance in Pseudomonas aeruginosa biofilms [J].
Brooun, A ;
Liu, SH ;
Lewis, K .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2000, 44 (03) :640-646
[5]   MolProbity: all-atom contacts and structure validation for proteins and nucleic acids [J].
Davis, Ian W. ;
Leaver-Fay, Andrew ;
Chen, Vincent B. ;
Block, Jeremy N. ;
Kapral, Gary J. ;
Wang, Xueyi ;
Murray, Laura W. ;
Arendall, W. Bryan, III ;
Snoeyink, Jack ;
Richardson, Jane S. ;
Richardson, David C. .
NUCLEIC ACIDS RESEARCH, 2007, 35 :W375-W383
[6]   Coot:: model-building tools for molecular graphics [J].
Emsley, P ;
Cowtan, K .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 :2126-2132
[7]   Bacterial persistence: some new insights into an old phenomenon [J].
Jayaraman, R. .
JOURNAL OF BIOSCIENCES, 2008, 33 (05) :795-805
[8]   Bacterial persistence: A model of survival in changing environments [J].
Kussell, E ;
Kishony, R ;
Balaban, NQ ;
Leibler, S .
GENETICS, 2005, 169 (04) :1807-1814
[9]  
Lewis K, 2008, CURR TOP MICROBIOL, V322, P107
[10]   MOLECULAR-CLONING AND EXPRESSION OF HIPA, A GENE OF ESCHERICHIA-COLI K-12 THAT AFFECTS FREQUENCY OF PERSISTENCE AFTER INHIBITION OF MUREIN SYNTHESIS [J].
MOYED, HS ;
BRODERICK, SH .
JOURNAL OF BACTERIOLOGY, 1986, 166 (02) :399-403