Novel Enterobacter Lineage as Leading Cause of Nosocomial Outbreak Involving Carbapenemase-Producing Strains

被引:42
作者
Beyrouthy, Racha [1 ,2 ,3 ,4 ,5 ]
Barets, Marion [6 ]
Marion, Elodie [6 ]
Dananche, Cedric [6 ]
Dauwalder, Olivier [7 ,8 ]
Robin, Frederic [1 ,2 ,3 ,4 ,5 ]
Gauthier, Lauraine [9 ,10 ]
Jousset, Agnes [9 ,10 ]
Dortet, Laurent [9 ,10 ]
Guerin, Francois [11 ]
Benet, Thomas [6 ,8 ]
Cassier, Pierre [6 ]
Vanhems, Philippe [6 ,8 ]
Bonnet, Richard [1 ,2 ,3 ,4 ,5 ]
机构
[1] Ctr Hosp Univ, Clermont Ferrand, France
[2] Ctr Natl Reference Resistance Antibiot, Clermont Ferrand, France
[3] Univ Clermont Auvergne, Clermont Ferrand, France
[4] Inst Natl Sante & Rech Med, Clermont Ferrand, France
[5] INRA, Clermont Ferrand, France
[6] Hosp Civils Lyon, Hop Edouard Herriot, Lyon, France
[7] Hosp Civils Lyon, Groupement Hosp Est, Lyon, France
[8] Ctr Int Rech Infectiol, Lyon, France
[9] CHU Bicetre, Paris, France
[10] Ctr Natl Reference Associe Resistance Antibiot, Paris, France
[11] Ctr Hosp Univ, Caen, France
关键词
CLOACAE COMPLEX; PLASMID; IDENTIFICATION; RESISTANCE; BACTERIA; FRANCE; TRENDS;
D O I
10.3201/eid2408.180151
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
We investigated unusual carbapenemase-producing Enterobacter cloacae complex isolates (n = 8) in the novel sequence type (ST) 873, which caused nosocomial infections in 2 hospitals in France. Whole-genome sequence typing showed the 1-year persistence of the epidemic strain, which harbored a bla(VIM-4) ST1-IncHI2 plasmid, in 1 health institution and 2 closely related strains harboring bla(CTX-M-15) in the other. These isolates formed a new subgroup in the E. hormaechei metacluster, according to their hsp60 sequences and phylogenomic analysis. The average nucleotide identities, specific biochemical properties, and pangenomic and functional investigations of isolates suggested isolates of a novel species that had acquired genes associated with adhesion and mobility. The emergence of this novel Enterobacter phylogenetic lineage within hospitals should be closely monitored because of its ability to persist and spread.
引用
收藏
页码:1505 / 1515
页数:11
相关论文
共 32 条
[1]  
Akbari Majid, 2016, Iranian Biomedical Journal, V20, P49, DOI 10.7508/ibj.2016.01.007
[2]   A GENERAL-METHOD FOR DETECTING AND SIZING LARGE PLASMIDS [J].
BARTON, BM ;
HARDING, GP ;
ZUCCARELLI, AJ .
ANALYTICAL BIOCHEMISTRY, 1995, 226 (02) :235-240
[3]  
Beloin C, 2008, CURR TOP MICROBIOL, V322, P249
[4]   IS1R-Mediated Plasticity of IncL/M Plasmids Leads to the Insertion of blaOXA-48 into the Escherichia coli Chromosome [J].
Beyrouthy, R. ;
Robin, F. ;
Delmas, J. ;
Gibold, L. ;
Dalmasso, G. ;
Dabboussi, F. ;
Hamze, M. ;
Bonnet, R. .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2014, 58 (07) :3785-3790
[5]   ENTEROBACTER-ASBURIAE SP-NOV, A NEW SPECIES FOUND IN CLINICAL SPECIMENS, AND REASSIGNMENT OF ERWINIA-DISSOLVENS AND ERWINIA-NIMIPRESSURALIS TO THE GENUS ENTEROBACTER AS ENTEROBACTER-DISSOLVENS COMB-NOV AND ENTEROBACTER-NIMIPRESSURALIS COMB-NOV [J].
BRENNER, DJ ;
MCWHORTER, AC ;
KAI, A ;
STEIGERWALT, AG ;
FARMER, JJ .
JOURNAL OF CLINICAL MICROBIOLOGY, 1986, 23 (06) :1114-1120
[6]   Resistance Plasmid Families in Enterobacteriaceae [J].
Carattoli, Alessandra .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2009, 53 (06) :2227-2238
[7]   Comprehensive Genome Analysis of Carbapenemase-Producing Enterobacter spp.: New Insights into Phylogeny, Population Structure, and Resistance Mechanisms [J].
Chavda, Kalyan D. ;
Chen, Liang ;
Fouts, Derrick E. ;
Sutton, Granger ;
Brinkac, Lauren ;
Jenkins, Stephen G. ;
Bonomo, Robert A. ;
Adams, Mark D. ;
Kreiswirth, Barry N. .
MBIO, 2016, 7 (06)
[8]   Characterization of the IncA/C plasmid pCC416 encoding VIM-4 and CMY-4 β-lactamases [J].
Colinon, Celine ;
Miriagou, Vivi ;
Carattoli, Alessandra ;
Luzzaro, Francesco ;
Rossolini, Gian Maria .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2007, 60 (02) :258-262
[9]  
Dortet L, 2017, EUROSURVEILLANCE, V22, P10, DOI [10.2807/1560-7917.ES.2017.22.6.30461, 10.2807/1560-7917.es.2017.22.6.30461]
[10]   Evaluation of the RAPIDEC® CARBA NP, the Rapid CARB Screen® and the Carba NP test for biochemical detection of carbapenemase-producing Enterobacteriaceae [J].
Dortet, Laurent ;
Agathine, Aurelie ;
Naas, Thierry ;
Cuzon, Gaelle ;
Poirel, Laurent ;
Nordmann, Patrice .
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY, 2015, 70 (11) :3014-3022