Development of QSAR models for predicting hepatocarcinogenic toxicity of chemicals

被引:11
|
作者
Massarelli, Ilaria [2 ]
Imbriani, Marcello [3 ]
Coi, Alessio [1 ]
Saraceno, Marilena [1 ]
Carli, Niccolo
Bianucci, Anna Maria [1 ]
机构
[1] Univ Pisa, Dipartimento Sci Farmaceut, I-56126 Pisa, Italy
[2] Ist Nazl Sci & Tecnol Mat, I-50121 Florence, Italy
[3] IRCCS, Fdn S Maugeri, I-27100 Pavia, Italy
关键词
Carcinogenic potency database; WEKA; Quantitative structure-activity relationship; Hepatocarcinogenic; Sphere-exclusion; RODENT CARCINOGENICITY; QUANTITATIVE STRUCTURE; CANCER; SELECTION;
D O I
10.1016/j.ejmech.2009.02.014
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
A dataset comprising 55 chemicals with hepatocarcinogenic potency indices was collected from the Carcinogenic Potency Database with the aim of developing QSAR models enabling prediction of the above unwanted property for New Chemical Entities. The dataset was rationally split into training and test sets by means of a sphere-exclusion type algorithm. Among the many algorithms explored to search regression models, only a Support Vector Machine (SVM) method led to a QSAR model, which was proved to pass rigorous validation criteria, in accordance with the OECD guidelines. The proposed model is capable to explain the hepatocarcinogenic toxicity and could be exploited for predicting this property for chemicals at the early stage of their development, so optimizing resources and reducing animal testing. (C) 2009 Elsevier Masson SAS. All rights reserved.
引用
收藏
页码:3658 / 3664
页数:7
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