BRUSELAS: HPC Generic and Customizable Software Architecture for 3D Ligand-Based Virtual Screening of Large Molecular Databases
被引:13
作者:
Banegas-Luna, Antonio J.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Catolica San Antonio de Murcia UCAM, Bioinformat & High Performance Comp Res Grp BIO H, Dept Comp Engn, Campus Jeronimos S-N, Murcia 30107, SpainUniv Catolica San Antonio de Murcia UCAM, Bioinformat & High Performance Comp Res Grp BIO H, Dept Comp Engn, Campus Jeronimos S-N, Murcia 30107, Spain
Banegas-Luna, Antonio J.
[1
]
Ceron-Carrasco, Jose P.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Catolica San Antonio de Murcia UCAM, Bioinformat & High Performance Comp Res Grp BIO H, Dept Comp Engn, Campus Jeronimos S-N, Murcia 30107, SpainUniv Catolica San Antonio de Murcia UCAM, Bioinformat & High Performance Comp Res Grp BIO H, Dept Comp Engn, Campus Jeronimos S-N, Murcia 30107, Spain
Ceron-Carrasco, Jose P.
[1
]
Puertas-Martin, Savins
论文数: 0引用数: 0
h-index: 0
机构:
Univ Almeria, Dept Informat, Supercomp Algorithms Res Grp SAL, CeiA3, Agrifood Campus Int Excellence, Almeria 04120, SpainUniv Catolica San Antonio de Murcia UCAM, Bioinformat & High Performance Comp Res Grp BIO H, Dept Comp Engn, Campus Jeronimos S-N, Murcia 30107, Spain
Puertas-Martin, Savins
[2
]
Perez-Sanchez, Horacio
论文数: 0引用数: 0
h-index: 0
机构:
Univ Catolica San Antonio de Murcia UCAM, Bioinformat & High Performance Comp Res Grp BIO H, Dept Comp Engn, Campus Jeronimos S-N, Murcia 30107, SpainUniv Catolica San Antonio de Murcia UCAM, Bioinformat & High Performance Comp Res Grp BIO H, Dept Comp Engn, Campus Jeronimos S-N, Murcia 30107, Spain
Perez-Sanchez, Horacio
[1
]
机构:
[1] Univ Catolica San Antonio de Murcia UCAM, Bioinformat & High Performance Comp Res Grp BIO H, Dept Comp Engn, Campus Jeronimos S-N, Murcia 30107, Spain
[2] Univ Almeria, Dept Informat, Supercomp Algorithms Res Grp SAL, CeiA3, Agrifood Campus Int Excellence, Almeria 04120, Spain
INDOLEAMINE 2,3-DIOXYGENASE;
DRUG DISCOVERY;
HYBRID APPROACH;
WEB SERVER;
INHIBITORS;
IDENTIFICATION;
ANTAGONISTS;
AGONISTS;
DOCKING;
SHAFTS;
D O I:
10.1021/acs.jcim.9b00279
中图分类号:
R914 [药物化学];
学科分类号:
100701 ;
摘要:
BRUSELAS (balanced rapid and unrestricted server for extensive ligand-aimed screening) is a novel, highly efficient web software architecture for 3D shape and pharmacophore searches in off the cuff libraries. A wide panel of shape and pharmacophore similarity algorithms are combined to avoid unbiased results while yielding consensus scoring functions. To evaluate its reliability, BRUSELAS was tested against other similar servers (e.g., USR-VS, SwissSimilarity, ChemMapper) to search for potential antidiabetic drugs. A web tool is developed for users to customize their tasks and is accessible free of any charge or login at http://bio-hpc.eu/software/Bruselas. Source code is available on request.
引用
收藏
页码:2805 / 2817
页数:13
相关论文
共 65 条
[61]
Wettergreen Sara A., 2016, Pharmacy Pract (Granada), V14, P832, DOI [10.18549/pharmpract.2016.04.832, 10.18549/PharmPract.2016.04.832]
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Yan, Xin
;
Li, Jiabo
论文数: 0引用数: 0
h-index: 0
机构:
SciNet Technol, San Diego, CA 92127 USA
Accelrys Inc, San Diego, CA 92121 USASun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Li, Jiabo
;
Liu, Zhihong
论文数: 0引用数: 0
h-index: 0
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Liu, Zhihong
;
Zheng, Minghao
论文数: 0引用数: 0
h-index: 0
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Zheng, Minghao
;
Ge, Hu
论文数: 0引用数: 0
h-index: 0
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Ge, Hu
;
Xu, Jun
论文数: 0引用数: 0
h-index: 0
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
机构:
Qingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Zhang, Guoqing
;
Xing, Jing
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Xing, Jing
;
Wang, Yulan
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Wang, Yulan
;
Wang, Lihao
论文数: 0引用数: 0
h-index: 0
机构:
East China Univ Sci & Technol, Sch Sci, Shanghai, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Wang, Lihao
;
Ye, Yan
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Ye, Yan
;
Lu, Dong
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Lu, Dong
;
Zhao, Jihui
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Zhao, Jihui
;
Luo, Xiaomin
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Luo, Xiaomin
;
Zheng, Mingyue
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Zheng, Mingyue
;
Yan, Shiying
论文数: 0引用数: 0
h-index: 0
机构:
Qingdao Univ, Sch Phys Sci, Qingdao, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Yan, Xin
;
Li, Jiabo
论文数: 0引用数: 0
h-index: 0
机构:
SciNet Technol, San Diego, CA 92127 USA
Accelrys Inc, San Diego, CA 92121 USASun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Li, Jiabo
;
Liu, Zhihong
论文数: 0引用数: 0
h-index: 0
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Liu, Zhihong
;
Zheng, Minghao
论文数: 0引用数: 0
h-index: 0
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Zheng, Minghao
;
Ge, Hu
论文数: 0引用数: 0
h-index: 0
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
Ge, Hu
;
Xu, Jun
论文数: 0引用数: 0
h-index: 0
机构:
Sun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R ChinaSun Yat Sen Univ, Sch Pharmaceut Sci, Res Ctr Drug Discovery, Guangzhou 510006, Guangdong, Peoples R China
机构:
Qingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Zhang, Guoqing
;
Xing, Jing
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Xing, Jing
;
Wang, Yulan
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Wang, Yulan
;
Wang, Lihao
论文数: 0引用数: 0
h-index: 0
机构:
East China Univ Sci & Technol, Sch Sci, Shanghai, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Wang, Lihao
;
Ye, Yan
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Ye, Yan
;
Lu, Dong
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Lu, Dong
;
Zhao, Jihui
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R China
Univ Chinese Acad Sci, Dept Pharm, Beijing, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Zhao, Jihui
;
Luo, Xiaomin
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Luo, Xiaomin
;
Zheng, Mingyue
论文数: 0引用数: 0
h-index: 0
机构:
Chinese Acad Sci, Shanghai Inst Mat Med, Drug Discovery & Design Ctr, State Key Lab Drug Res, Shanghai, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China
Zheng, Mingyue
;
Yan, Shiying
论文数: 0引用数: 0
h-index: 0
机构:
Qingdao Univ, Sch Phys Sci, Qingdao, Peoples R ChinaQingdao Univ, Sch Phys Sci, Qingdao, Peoples R China