Genome-wide identification and abiotic stress-responsive expression of MLP family genes in Brassica rapa

被引:10
作者
Zeng, Jiaxin
Ruan, Yuxuan
Liu, Boyu
Ruan, Ying [1 ]
Huang, Yong [1 ]
机构
[1] Hunan Agr Univ, Coll Biosci & Biotechnol, Changsha 410128, Peoples R China
关键词
Brassica rapa; Genome-wide analysis; MLP gene family; Gene expression; POSITIVE REGULATOR; PROTEIN; DEFENSE; ETHYLENE; L;
D O I
10.1016/j.genrep.2020.100919
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The major latex protein/ripening-related protein (MLP/RRP) subfamily plays a key role in the growth, development, and stress resistance of plants. Brassica rapa is an important oil crop in China but also represents a model species for studying plant evolution. The specific roles of the MLP gene family in the development of B. rapa have yet to be elucidated. Here, we identified 31 MLPs from B. rapa (BrMLPs) which could have belonged to 3 groups. Using bioinformatics tools, we investigated and compared the 31 MLPs with regards to gene exons, gene substructures, protein domains, and chromosomal location. Real-time quantitative polymerase chain reaction (RT-PCR) was then carried out to investigate the expression of the 31 BrMLPs, using Murashige and Skoog as contrast, with three types of processing conditions (NaCl), abscisic acid (ABA), and mannitol and over three time periods (1, 3, and 6 h). Our data showed that BrMLP1/6 plays a role in resistance to drought and salt resistance. Collectively, our findings provide a useful foundation or improving the resistance of B. rapa to period of drought and salty conditions.
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页数:9
相关论文
共 31 条
[1]   Cloning and characterization of the Gossypium hirsutum major latex protein gene and functional analysis in Arabidopsis thaliana [J].
Chen, Jie-Yin ;
Dai, Xiao-Feng .
PLANTA, 2010, 231 (04) :861-873
[2]   Transcriptome-based gene expression profiling of diploid radish (Raphanus sativus L.) and the corresponding autotetraploid [J].
Cheng, Wanwan ;
Tang, Mingjia ;
Xie, Yang ;
Xu, Liang ;
Wang, Yan ;
Luo, Xiaobo ;
Fan, Lianxue ;
Liu, Liwang .
MOLECULAR BIOLOGY REPORTS, 2019, 46 (01) :933-945
[3]   Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms [J].
Chou, Kuo-Chen ;
Shen, Hong-Bin .
NATURE PROTOCOLS, 2008, 3 (02) :153-162
[4]   Large-scale plant protein subcellular location prediction [J].
Chou, Kuo-Chen ;
Shen, Hong-Bin .
JOURNAL OF CELLULAR BIOCHEMISTRY, 2007, 100 (03) :665-678
[5]   Plant-mPLoc: A Top-Down Strategy to Augment the Power for Predicting Plant Protein Subcellular Localization [J].
Chou, Kuo-Chen ;
Shen, Hong-Bin .
PLOS ONE, 2010, 5 (06)
[6]   Structural and bioinformatic analysis of the kiwifruit allergen Act d 11, a member of the family of ripening-related proteins [J].
Chruszcz, Maksymilian ;
Ciardiello, Maria Antonietta ;
Osinski, Tomasz ;
Majorek, Karolina A. ;
Giangrieco, Ivana ;
Font, Jose ;
Breiteneder, Heimo ;
Thalassinos, Konstantinos ;
Minor, Wladek .
MOLECULAR IMMUNOLOGY, 2013, 56 (04) :794-803
[7]   Secretome analysis of chickpea reveals dynamic extracellular remodeling and identifies a Bet v1-like protein, CaRRP1 that participates in stress response [J].
Gupta, Sonika ;
Wardhan, Vijay ;
Kumar, Amit ;
Rathi, Divya ;
Pandey, Aarti ;
Chakraborty, Subhra ;
Chakraborty, Niranjan .
SCIENTIFIC REPORTS, 2015, 5
[8]   Synthesis versus degradation: directions of amino acid metabolism during Arabidopsis abiotic stress response [J].
Hildebrandt, Tatjana M. .
PLANT MOLECULAR BIOLOGY, 2018, 98 (1-2) :121-135
[9]   A Major Latex-Like Protein Is a Key Factor in Crop Contamination by Persistent Organic Pollutants [J].
Inui, Hideyuki ;
Sawada, Mami ;
Goto, Junya ;
Yamazaki, Kiyoshi ;
Kodama, Noriko ;
Tsuruta, Hiroki ;
Eun, Heesoo .
PLANT PHYSIOLOGY, 2013, 161 (04) :2128-2135
[10]  
Khan F.A., 2015, AM-EURASIAN J AGRIC, V15, P1568, DOI [10.5829/idosi.aejaes.2015.15.8.12746, DOI 10.5829/idosi.aejaes.2015.15.8.12746]