Tethering: Fragment-based drug discovery

被引:298
作者
Erlanson, DA [1 ]
Wells, JA [1 ]
Braisted, AC [1 ]
机构
[1] Sunesis Pharmaceut Inc, San Francisco, CA 94080 USA
来源
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE | 2004年 / 33卷
关键词
disulfide exchange; small-molecule inhibitors; fragment assembly; structure-based drug design; molecular recognition;
D O I
10.1146/annurev.biophys.33.110502.140409
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The genomics revolution has provided a deluge of new targets for drug discovery. To facilitate the drug discovery process, many researchers are turning to fragment-based approaches to find lead molecules more efficiently. One such method, Tethering(1), allows for the identification of small-molecule fragments that bind to specific regions of a protein target. These fragments can then be elaborated, combined with other molecules, or combined with one another to provide high-affinity drug leads. In this review we describe the background and theory behind Tethering and discuss its use in identifying novel inhibitors for protein targets including interleukin-2 (IL-2), thymidylate synthase (TS), protein tyrosine phosphatase 1B (PTP-1B), and caspases.
引用
收藏
页码:199 / 223
页数:29
相关论文
共 81 条
[1]   Identification of potent and novel small-molecule inhibitors of caspase-3 [J].
Allen, DA ;
Pham, P ;
Choong, IC ;
Fahr, B ;
Burdett, MT ;
Lew, W ;
DeLano, WL ;
Gordon, EM ;
Lam, JW ;
O'Brien, T ;
Lee, D .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2003, 13 (21) :3651-3655
[2]   Discovery and SAR of a novel selective and orally bioavailable nonpeptide classical competitive inhibitor class of protein-tyrosine phosphatase 1B [J].
Andersen, HS ;
Olsen, OH ;
Iversen, LF ;
Sorensen, ALP ;
Mortensen, SB ;
Christensen, MS ;
Branner, S ;
Hansen, TK ;
Lau, JF ;
Jeppesen, L ;
Moran, EJ ;
Su, J ;
Bakir, F ;
Judge, L ;
Shahbaz, M ;
Collins, T ;
Vo, T ;
Newman, MJ ;
Ripka, WC ;
Moller, NPH .
JOURNAL OF MEDICINAL CHEMISTRY, 2002, 45 (20) :4443-4459
[3]   α-Haloacetophenone derivatives as photoreversible covalent inhibitors of protein tyrosine phosphatases [J].
Arabaci, G ;
Guo, XC ;
Beebe, KD ;
Coggeshall, KM ;
Pei, D .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (21) :5085-5086
[4]   Binding of small molecules to an adaptive protein-protein interface [J].
Arkin, MR ;
Randal, M ;
DeLano, WL ;
Hyde, J ;
Luong, TN ;
Oslob, JD ;
Raphael, DR ;
Taylor, L ;
Wang, J ;
McDowell, RS ;
Wells, JA ;
Braisted, AC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (04) :1603-1608
[5]   Regulation of PTP1B via glutathionylation of the active site cysteine 215 [J].
Barrett, WC ;
DeGnore, JP ;
König, S ;
Fales, HM ;
Keng, YF ;
Zhang, ZY ;
Yim, MB ;
Chock, PB .
BIOCHEMISTRY, 1999, 38 (20) :6699-6705
[6]   High-throughput crystallography for lead discovery in drug design [J].
Blundell, TL ;
Jhoti, H ;
Abell, C .
NATURE REVIEWS DRUG DISCOVERY, 2002, 1 (01) :45-54
[7]   Novel inhibitors of DNA gyrase: 3D structure based biased needle screening, hit validation by biophysical methods, and 3D guided optimization. A promising alternative to random screening [J].
Boehm, HJ ;
Boehringer, M ;
Bur, D ;
Gmuender, H ;
Huber, W ;
Klaus, W ;
Kostrewa, D ;
Kuehne, H ;
Luebbers, T ;
Meunier-Keller, N .
JOURNAL OF MEDICINAL CHEMISTRY, 2000, 43 (14) :2664-2674
[8]  
Bohacek RS, 1996, MED RES REV, V16, P3, DOI 10.1002/(SICI)1098-1128(199601)16:1<3::AID-MED1>3.3.CO
[9]  
2-D
[10]   Discovery of a potent small molecule IL-2 inhibitor through fragment assembly [J].
Braisted, AC ;
Oslob, JD ;
Delano, WL ;
Hyde, J ;
McDowell, RS ;
Waal, N ;
Yu, C ;
Arkin, MR ;
Raimundo, BC .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (13) :3714-3715