Dielectric relaxation of the extended hydration sheathe of DNA in the THz frequency region

被引:27
作者
Polley, Debanjan [1 ,2 ]
Patra, Animesh [1 ]
Mitra, Rajib Kumar [1 ]
机构
[1] SN Bose Natl Ctr Basic Sci, Dept Chem Biol & Macromol Sci, Kolkata 700098, India
[2] SN Bose Natl Ctr Basic Sci, Dept Condensed Matter Phys & Mat Sci, Kolkata 700098, India
关键词
TIME-DOMAIN SPECTROSCOPY; REFLECTION SPECTROSCOPY; TERAHERTZ SPECTROSCOPY; PULSE SPECTROSCOPY; ULTRAFAST DYNAMICS; VIBRATIONAL-MODES; BIOLOGICAL WATER; MINOR-GROOVE; LIQUID WATER; ABSORPTION;
D O I
10.1016/j.cplett.2013.09.026
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Here we report the dielectric relaxation study of extended hydration sheathe of dilute aqueous solution of two DNA samples, extracted from salmon sperm (SS DNA) and calf thymus (CT DNA) at different concentrations in the frequency range of 0.3-2.1 THz. The frequency dependent complex dielectric response has been fitted according to a Debye relaxation model assuming three relaxation modes. The observed relaxation time constants do not deviate much from that of bulk water and do not follow any particular trend indicating to a marginal modification of the extended hydrogen bonded network of DNA. (C) 2013 Elsevier B. V. All rights reserved.
引用
收藏
页码:143 / 147
页数:5
相关论文
共 49 条
  • [1] Alkorta I, 1996, INT J QUANTUM CHEM, V57, P123, DOI 10.1002/(SICI)1097-461X(1996)57:1<123::AID-QUA14>3.0.CO
  • [2] 2-9
  • [3] Ultrafast dynamics in DNA: "fraying" at the end of the helix
    Andreatta, Daniele
    Sen, Sobhan
    Lustres, J. Luis Perez
    Kovalenko, Sergey A.
    Ernsting, Nikolaus P.
    Murphy, Catherine J.
    Coleman, Robert S.
    Berg, Mark A.
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (21) : 6885 - 6892
  • [4] Terahertz-time domain spectroscopy for the detection of PCR amplified DNA in aqueous solution
    Arora, Arun
    Trung Quan Luong
    Krueger, Matthias
    Kim, Young Jun
    Nam, Chang-Hoon
    Manz, Andreas
    Havenith, Martina
    [J]. ANALYST, 2012, 137 (03) : 575 - 579
  • [5] Water as an active constituent in cell biology
    Ball, Philip
    [J]. CHEMICAL REVIEWS, 2008, 108 (01) : 74 - 108
  • [6] Direct observation of essential DNA dynamics: Melting and reformation of the DNA minor groove
    Banerjee, Debapriya
    Pal, Samir Kumar
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2007, 111 (36) : 10833 - 10838
  • [7] Dielectric relaxation change of water upon phase transition of a lipid bilayer probed by terahertz time domain spectroscopy
    Choi, Da-Hye
    Son, Heyjin
    Jung, Seonghoon
    Park, Jaehun
    Park, Woong-Yang
    Kwon, Oh Sang
    Park, Gun-Sik
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2012, 137 (17)
  • [8] ABSORPTION-COEFFICIENT AND REFRACTIVE-INDEX MEASUREMENTS OF WATER IN THE MILLIMETER SPECTRAL RANGE
    CZUMAJ, Z
    [J]. MOLECULAR PHYSICS, 1990, 69 (04) : 787 - 790
  • [9] An extended dynamical hydration shell around proteins
    Ebbinghaus, Simon
    Kim, Seung Joong
    Heyden, Matthias
    Yu, Xin
    Heugen, Udo
    Gruebele, Martin
    Leitner, David M.
    Havenith, Martina
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (52) : 20749 - 20752
  • [10] Slaving: Solvent fluctuations dominate protein dynamics and functions
    Fenimore, PW
    Frauenfelder, H
    McMahon, BH
    Parak, FG
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (25) : 16047 - 16051