Fourteen complete mitochondrial genomes of butterflies from the genus Lethe (Lepidoptera, Nymphalidae, Satyrinae) with mitogenome-based phylogenetic analysis

被引:36
作者
Chen, Lu [1 ,2 ]
Wahlberg, Niklas [3 ]
Liao, Cheng-Qing [1 ,2 ]
Wang, Chen-Bin [4 ]
Ma, Fang-Zhou [4 ]
Huang, Guo-Hua [1 ,2 ]
机构
[1] Hunan Agr Univ, Coll Plant Protect, Changsha 410128, Hunan, Peoples R China
[2] Hunan Agr Univ, Hunan Prov Key Lab Biol & Control Plant Dis & Ins, Nongda Rd 1, Changsha 410128, Hunan, Peoples R China
[3] Lund Univ, Dept Biol, Systemat Biol Grp, Lund, Sweden
[4] Minist Environm Protect, Nanjing Inst Environm Sci, State Key Lab Biosafety, Nanjing 210042, Jiangsu, Peoples R China
关键词
Lethe; Mitochondrial genome; Phylogenetic analysis; DE-NOVO ASSEMBLER; SUBFAMILY ELYMNINAE; IQ-TREE; SEQUENCE; INSECTA; COLEOPTERA; BEETLE; IDBA; ORGANIZATION; SOFTWARE;
D O I
10.1016/j.ygeno.2020.07.042
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The mitochondrial genome (mitogenome) can help us understand the phylogenetic relationships within the genus Lethe and the subfamily Satyrinae. In this study, we sequenced the complete mitogenomes of 14 Lethe species, which range in size from 15,225 to 15,271 bp, with both 37 genes (13 PCGs, 22 tRNAs, 2 rRNAs) and a noncoding A + T-rich region. The gene arrangement and orientation is similar to typical mitogenomes of Lepidoptera. The Ka/Ks ratio shows that cox1 has the slowest evolutionary rate. The secondary structure of trnN lacks the Pseudouracil loop (T psi C loop) in most Lethe species. The inferred phylogenetic analyses show that Lethe is a well-supported monophyletic group, and reveal 2 major clades within the genus Lethe, which is consistent with previous morphological classifications.
引用
收藏
页码:4435 / 4441
页数:7
相关论文
共 34 条
[31]   Phylogeny and Evolution of Multiple Common Carp (Cyprinus carpio L.) Populations Clarified by Phylogenetic Analysis Based on Complete Mitochondrial Genomes [J].
Chuanju Dong ;
Jian Xu ;
Baosen Wang ;
Jianxin Feng ;
Zsigmond Jeney ;
Xiaowen Sun ;
Peng Xu .
Marine Biotechnology, 2015, 17 :565-575
[32]   Phylogenetic analysis based on the complete mitochondrial genome of Discogobio brachyphysallidos (Cypriniformes: Cyprinidae) suggests the need for taxonomic revision at the genus level [J].
Chen, Fangcan ;
Lu, Pingke ;
Liang, Dejin ;
Wu, Yuli ;
Jiang, Zhiyong ;
Huang, Wei ;
Gao, Liuling .
MITOCHONDRIAL DNA PART B-RESOURCES, 2024, 9 (01) :200-203
[33]   Phylogenetic analysis of Oryza species, based on simple sequence repeats and their flanking nucleotide sequences from the mitochondrial and chloroplast genomes [J].
Tomotaro Nishikawa ;
Duncan A. Vaughan ;
Koh-ichi Kadowaki .
Theoretical and Applied Genetics, 2005, 110 :696-705
[34]   Phylogenetic relationships and taxonomic position of genus Hyperacrius (Rodentia: Arvicolinae) from Kashmir based on evidences from analysis of mitochondrial genome and study of skull morphology [J].
Abramson, Natalia, I ;
Golenishchev, Fedor N. ;
Bodrov, Semen Yu ;
Bondareva, Olga, V ;
Genelt-Yanovskiy, Evgeny A. ;
Petrova, Tatyana, V .
PEERJ, 2020, 8