A density functional theory study of vibrational infrared spectra of N-methyl-P tautomers

被引:1
|
作者
Podolyan, Yevgeniy
Lipkowski, Pawel
Leszczynski, Jerzy [1 ]
机构
[1] Jackson State Univ, Dept Chem, Computat Ctr Mol Struct & Interact, Jackson, MS 39217 USA
[2] Wroclaw Univ Technol, Inst Phys & Theoret Chem, PL-50370 Wroclaw, Poland
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
dP; N-methyl-P; DNA bases; infrared spectra; density functional theory;
D O I
10.1016/j.molstruc.2005.10.056
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The results of the first theoretical calculations of the vibrational infrared spectra of three tautomers of N-methylated P base, which is an analog of nucleic acid bases, have been reported. All geometry optimizations and infrared spectra calculations have been performed at B3LYP level of theory using cc-pVDZ basis set. The differences in the spectra of tautomers are attributed primarily to the proton being bonded to either oxygen (enol form) or nitrogen (amino and imino forms) atoms. Some of the vibrations have been predicted to be different in amino form due to a much more bent structure of the ring as compared to that in the imino and enol forms. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:9 / 15
页数:7
相关论文
共 50 条
  • [1] Study on Vibrational Spectra of Cypermethrin Based on Density Functional Theory
    Liang Xiao-rui
    Cong Jing-xian
    Li Yin
    Liu Jie
    Jin Liang-jie
    Sun Xiao-wei
    Li Xiao-dong
    SPECTROSCOPY AND SPECTRAL ANALYSIS, 2023, 43 (05) : 1381 - 1386
  • [2] The Study on Infrared Spectra of 7-Hydroxycoumarin by Density Functional Theory
    Jia Fei-yun
    Su Yu
    Ran Ming
    Zhu Jiang
    Zhang Bo
    SPECTROSCOPY AND SPECTRAL ANALYSIS, 2016, 36 (01) : 60 - 63
  • [3] Density functional theory study of vibrational spectra of acridine and phenazine
    Fu, AP
    Du, DM
    Zhou, ZY
    SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2003, 59 (02) : 245 - 253
  • [4] Density functional theory study of vibrational spectra, and assignment of fundamental vibrational modes of succinimide and N-bromosuccinimide
    Krishnakumar, V
    Xavier, RJ
    Chithambarathanu, T
    SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2005, 62 (4-5) : 931 - 939
  • [5] Comprehensive Density Functional Theory Studies of Vibrational Spectra of Carbonates
    Zhuravlev, Yurii N.
    Atuchin, Victor V.
    NANOMATERIALS, 2020, 10 (11) : 1 - 19
  • [6] Density Functional Theory Study of the Stability and Vibrational Spectra of the β-Carotene Isomers
    Ceron-Carrasco, J. P.
    Bastida, A.
    Zuniga, J.
    Requena, A.
    Miguel, B.
    JOURNAL OF PHYSICAL CHEMISTRY A, 2009, 113 (36): : 9899 - 9907
  • [7] MODELING OF STRUCTURES AND CALCULATION OF IR VIBRATIONAL SPECTRA OF N,N-DIMETHYLFORMAMIDE DIMERS BY DENSITY FUNCTIONAL THEORY
    Shundalau, M. B.
    Chybirai, P. S.
    Komyak, A. I.
    Zazhogin, A. P.
    Ksenofontov, M. A.
    Umreiko, D. S.
    JOURNAL OF APPLIED SPECTROSCOPY, 2011, 78 (03) : 326 - 336
  • [8] Density functional theory study on the structure and vibrational spectra for 4-methyl-3-pentene-2-one
    Zhou, ZY
    Du, DM
    Fu, AP
    Yu, QS
    JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2000, 530 (1-2): : 149 - 154
  • [9] Vibrational Spectra and Density Functional Theory Calculations of Metallotriphenylcorroles
    Gao, Hui-ling
    Chen, Fang
    Wang, Chun-lei
    Wang, Guo-bing
    Chen, Dong-ming
    CHINESE JOURNAL OF CHEMICAL PHYSICS, 2013, 26 (04) : 398 - 408
  • [10] Density functional theory study of vibrational spectra .1. Performance of several density functional methods in predicting vibrational frequencies
    Zhou, XF
    Wheeless, CJM
    Liu, RF
    VIBRATIONAL SPECTROSCOPY, 1996, 12 (01) : 53 - 63