Roseomonas soli sp nova, isolated from an agricultural soil cultivated with Chinese cabbage (Brassica campestris)

被引:38
作者
Kim, Dong-Uk
Ka, Jong-Ok [1 ]
机构
[1] Seoul Natl Univ, Dept Agr Biotechnol, Seoul 151742, South Korea
关键词
WATER; GILARDII; PATIENT; GENUS; PERITONITIS; BACTEREMIA; DIVERSITY; ACID; LAKE; RNA;
D O I
10.1099/ijs.0.053827-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A bacterial strain, designated 5N26(T), was isolated from an agricultural soil cultivated with Chinese cabbage (Brassica campestris). Cells of this strain were Gram-reaction-negative, strictly aerobic, motile, non-spore-forming rods, and catalase- and urease-negative. The major fatty acids of strain 5N26(T) were C-16:0 (7.5%), C-18:1 2-OH (13.4%) and summed feature 8 (C-18:1 omega 6c and/or C-18:1 omega 7c; 63.2%). The polar lipid profile contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylmonomethylethanolamine and one unidentified aminolipid. The G+C content of the genomic DNA of strain 5N26(T) was 68.3 mol%. 16S rRNA gene sequence analysis showed that strain 5N26(T) was phylogenetically related to Roseomonas lacus TH-G33(T) and Roseomonas terrae DS-48(T) (97.0 % and 96.6% sequence similarity, respectively). The results of genotypic and phenotypic data showed that strain 5N26(T) could be distinguished from phylogenetically related species, and that this strain represented a novel species within the genus Roseomonas, for which the name Roseomonas soli sp. nov. (type strain 5N26(T)=KACC 16376(T)=NBRC 109097(T)) is proposed.
引用
收藏
页码:1024 / 1029
页数:6
相关论文
共 34 条
  • [1] Roseomonas riguiloci sp nov., isolated from wetland freshwater
    Baik, Keun Sik
    Park, Seong Chan
    Choe, Han Na
    Kim, Se Na
    Moon, Jae-Hak
    Seong, Chi Nam
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2012, 62 : 3024 - 3029
  • [2] Review and re-analysis of domain-specific 16S primers
    Baker, GC
    Smith, JJ
    Cowan, DA
    [J]. JOURNAL OF MICROBIOLOGICAL METHODS, 2003, 55 (03) : 541 - 555
  • [3] Roseomonas mucosa Isolated from Bloodstream of Pediatric Patient
    Bard, J. Dien
    Deville, J. G.
    Summanen, P. H.
    Lewinski, M. A.
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (08) : 3027 - 3029
  • [4] Bibashi E, 2000, J CLIN MICROBIOL, V38, P456
  • [5] EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    Chun, Jongsik
    Lee, Jae-Hak
    Jung, Yoonyoung
    Kim, Myungjin
    Kim, Seil
    Kim, Byung Kwon
    Lim, Young-Woon
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 2259 - 2261
  • [6] FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
  • [7] TOWARD DEFINING COURSE OF EVOLUTION - MINIMUM CHANGE FOR A SPECIFIC TREE TOPOLOGY
    FITCH, WM
    [J]. SYSTEMATIC ZOOLOGY, 1971, 20 (04): : 406 - &
  • [8] Roseomonas stagni sp nov., isolated from pond water in Japan
    Furuhata, Katsunori
    Miyamoto, Hiroshi
    Goto, Keiichi
    Kato, Yuko
    Hara, Motonobu
    Fukuyama, Masafumi
    [J]. JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY, 2008, 54 (03) : 167 - 171
  • [9] Roseomonas aquatica sp nov., isolated from drinking water
    Gallego, Virginia
    Sanchez-Porro, Cristina
    Garcia, Maria Teresa
    Ventosa, Antonio
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2006, 56 : 2291 - 2295
  • [10] Agrococcus jenensis gen nov, sp nov, a new genus of actinomycetes with diaminobutyric acid in the cell wall
    Groth, I
    Schumann, P
    Weiss, N
    Martin, K
    Rainey, FA
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (01): : 234 - 239