A k-space-to-image reconstruction network for MRI using recurrent neural network

被引:18
|
作者
Oh, Changheun [1 ,2 ]
Kim, Dongchan [2 ]
Chung, Jun-Young [2 ]
Han, Yeji [2 ]
Park, HyunWook [1 ]
机构
[1] Korea Adv Inst Sci & Technol KAIST, Dept Elect Engn, Daejeon, South Korea
[2] Gachon Univ, 191 Hambakmoe Ro, Incheon 21565, South Korea
基金
新加坡国家研究基金会;
关键词
deep learning; end‐ to‐ end reconstruction network (ETER‐ net); MR image reconstruction; parallel imaging; recurrent neural network;
D O I
10.1002/mp.14566
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Purpose Reconstructing the images from undersampled k-space data are an ill-posed inverse problem. As a solution to this problem, we propose a method to reconstruct magnetic resonance (MR) images directly from k-space data using a recurrent neural network. Methods A novel neural network architecture named "ETER-net" is developed as a unified solution to reconstruct MR images from undersampled k-space data, where two bi-RNNs and convolutional neural network (CNN) are utilized to perform domain transformation and de-aliasing. To demonstrate the practicality of the proposed method, we conducted model optimization, cross-validation, and network pruning using in-house data from a 3T MRI scanner and public dataset called "FastMRI." Results The experimental results showed that the proposed method could be utilized for accurate image reconstruction from undersampled k-space data. The size of the proposed model was optimized and cross-validation was performed to show the robustness of the proposed method. For in-house dataset (R = 4), the proposed method provided nMSE = 1.09% and SSIM = 0.938. For "FastMRI" dataset, the proposed method provided nMSE = 1.05 % and SSIM = 0.931 for R = 4, and nMSE = 3.12 % and SSIM = 0.884 for R = 8. The performance of the pruned model trained the loss function including with L2 regularization was consistent for a pruning ratio of up to 70%. Conclusions The proposed method is an end-to-end MR image reconstruction method based on recurrent neural networks. It performs direct mapping of the input k-space data and the reconstructed images, operating as a unified solution that is applicable to various scanning trajectories.
引用
收藏
页码:193 / 203
页数:11
相关论文
共 50 条
  • [21] MAGnitude-Image-to-Complex K-space (MAGIC-K) Net: A Data Augmentation Network for Image Reconstruction
    Wang, Fanwen
    Zhang, Hui
    Dai, Fei
    Chen, Weibo
    Wang, Chengyan
    Wang, He
    DIAGNOSTICS, 2021, 11 (10)
  • [22] An approach on discretizing time series using recurrent neural network
    Lei, Kuan-Cheok
    Zhang, Xiaohua Douglas
    PROCEEDINGS 2018 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2018, : 2522 - 2526
  • [23] Attacks Recognition Using Recurrent Neural Network
    Barradas-Acosta, Araceli
    Aguirre-Anaya, Eleazar
    Hector Perez-Meana, Mariko Nakano-Miytake
    PROCEEDINGS OF THE 15TH AMERICAN CONFERENCE ON APPLIED MATHEMATICS AND PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON COMPUTATIONAL AND INFORMATION SCIENCES 2009, VOLS I AND II, 2009, : 402 - +
  • [24] Evaluation on the generalization of a learned convolutional neural network for MRI reconstruction
    Huang, Jinhong
    Wang, Shoushi
    Zhou, Genjiao
    Hu, Wenyu
    Yu, Gaohang
    MAGNETIC RESONANCE IMAGING, 2022, 87 : 38 - 46
  • [25] Multiscanning Strategy-Based Recurrent Neural Network for Hyperspectral Image Classification
    Zhou, Weilian
    Kamata, Sei-ichiro
    Luo, Zhengbo
    Wang, Haipeng
    IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING, 2022, 60
  • [26] Medical Image Interpolation Using Recurrent Type-2 Fuzzy Neural Network
    Tavoosi, Jafar
    Zhang, Chunwei
    Mohammadzadeh, Ardashir
    Mobayen, Saleh
    Mosavi, Amir H.
    FRONTIERS IN NEUROINFORMATICS, 2021, 15
  • [27] Target-Dependent Scalable Image Compression Using a Reconfigurable Recurrent Neural Network
    Kim, Sang Hoon
    Park, Jae Hyun
    Ko, Jong Hwan
    IEEE ACCESS, 2021, 9 : 119418 - 119429
  • [28] Video Image Defogging Recognition Based on Recurrent Neural Network
    Jiang, Xiaoping
    Sun, Jing
    Li, Chenghua
    Ding, Hao
    IEEE TRANSACTIONS ON INDUSTRIAL INFORMATICS, 2018, 14 (07) : 3281 - 3288
  • [29] Program for sound generation based on image color spectrum with using the recurrent neural network
    Nikitin, Nikita A.
    Rozaliev, Vladimir L.
    Orlova, Yulia A.
    PROCEEDINGS OF THE IV INTERNATIONAL RESEARCH CONFERENCE INFORMATION TECHNOLOGIES IN SCIENCE, MANAGEMENT, SOCIAL SPHERE AND MEDICINE (ITSMSSM 2017), 2017, 72 : 227 - 232
  • [30] Spatial Sequential Recurrent Neural Network for Hyperspectral Image Classification
    Zhang, Xiangrong
    Sun, Yujia
    Jiang, Kai
    Li, Chen
    Jiao, Licheng
    Zhou, Huiyu
    IEEE JOURNAL OF SELECTED TOPICS IN APPLIED EARTH OBSERVATIONS AND REMOTE SENSING, 2018, 11 (11) : 4141 - 4155