Brain Disease Network Analysis to Elucidate the Neurological Manifestations of COVID-19

被引:39
作者
Prasad, Kartikay [1 ]
AlOmar, Suliman Yousef [2 ]
Alqahtani, Saeed Awad M. [3 ]
Malik, Md. Zubbair [4 ]
Kumar, Vijay [1 ]
机构
[1] Amity Univ, Amity Inst Neuropsychol & Neurosci, Noida 201303, India
[2] King Saud Univ, Dept Zool, Coll Sci, Doping Res Chair, Riyadh 11451, Saudi Arabia
[3] Taibah Univ, Dept Physiol, Fac Med, Medina, Saudi Arabia
[4] Jawaharlal Nehru Univ, Sch Computat & Integrat Sci, New Delhi 110067, India
关键词
COVID-19; Neurologic comorbidity; Network biology; Disease-gene interaction; Hub genes; Drug repurposing; PROTEIN COMPLEXES; PATHWAYS; BIOLOGY; GENES; MAP;
D O I
10.1007/s12035-020-02266-w
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Although COVID-19 largely causes respiratory complications, it can also lead to various extrapulmonary manifestations resulting in higher mortality and these comorbidities are posing a challenge to the health care system. Reports indicate that 30-60% of patients with COVID-19 suffer from neurological symptoms. To understand the molecular basis of the neurologic comorbidity in COVID-19 patients, we have investigated the genetic association between COVID-19 and various brain disorders through a systems biology-based network approach and observed a remarkable resemblance. Our results showed 123 brain-related disorders associated with COVID-19 and form a high-density disease-disease network. The brain-disease-gene network revealed five highly clustered modules demonstrating a greater complexity of COVID-19 infection. Moreover, we have identified 35 hub proteins of the network which were largely involved in the protein catabolic process, cell cycle, RNA metabolic process, and nuclear transport. Perturbing these hub proteins by drug repurposing will improve the clinical conditions in comorbidity. In the near future, we assumed that in COVID-19 patients, many other neurological manifestations will likely surface. Thus, understanding the infection mechanisms of SARS-CoV-2 and associated comorbidity is a high priority to contain its short- and long-term effects on human health. Our network-based analysis strengthens the understanding of the molecular basis of the neurological manifestations observed in COVID-19 and also suggests drug for repurposing.
引用
收藏
页码:1875 / 1893
页数:19
相关论文
共 79 条
  • [1] Network-Guided Discovery of Influenza Virus Replication Host Factors
    Ackerman, Emily E.
    Kawakami, Eiryo
    Katoh, Manami
    Watanabe, Tokiko
    Watanabe, Shinji
    Tomita, Yuriko
    Lopes, Tiago J.
    Matsuoka, Yukiko
    Kitano, Hiroaki
    Shoemaker, Jason E.
    Kawaoka, Yoshihiro
    [J]. MBIO, 2018, 9 (06): : 1 - 14
  • [2] An automated method for finding molecular complexes in large protein interaction networks
    Bader, GD
    Hogue, CW
    [J]. BMC BIOINFORMATICS, 2003, 4 (1)
  • [3] MYH9-Related Thrombocytopenia
    Ban, Byung Hoon
    Shah, Vrushali
    [J]. MAYO CLINIC PROCEEDINGS, 2017, 92 (07) : 1169 - 1170
  • [4] Network biology:: Understanding the cell's functional organization
    Barabási, AL
    Oltvai, ZN
    [J]. NATURE REVIEWS GENETICS, 2004, 5 (02) : 101 - U15
  • [5] Network medicine: a network-based approach to human disease
    Barabasi, Albert-Laszlo
    Gulbahce, Natali
    Loscalzo, Joseph
    [J]. NATURE REVIEWS GENETICS, 2011, 12 (01) : 56 - 68
  • [6] SARS-CoV-2 may regulate cellular responses through depletion of specific host miRNAs
    Bartoszewski, Rafal
    Dabrowski, Michal
    Jakiela, Bogdan
    Matalon, Sadis
    Harrod, Kevin S.
    Sanak, Marek
    Collawn, James F.
    [J]. AMERICAN JOURNAL OF PHYSIOLOGY-LUNG CELLULAR AND MOLECULAR PHYSIOLOGY, 2020, 319 (03) : L444 - L455
  • [7] The TissueNet v.2 database: A quantitative view of protein-protein interactions across human tissues
    Basha, Omer
    Barshir, Ruth
    Sharon, Moran
    Lerman, Eugene
    Kirson, Binyamin F.
    Hekselman, Idan
    Yeger-Lotem, Esti
    [J]. NUCLEIC ACIDS RESEARCH, 2017, 45 (D1) : D427 - D431
  • [8] Characteristics of ischaemic stroke associated with COVID-19
    Beyrouti, Rahma
    Adams, Matthew E.
    Benjamin, Laura
    Cohen, Hannah
    Farmer, Simon F.
    Goh, Yee Yen
    Humphries, Fiona
    Jager, Hans Rolf
    Losseff, Nicholas A.
    Perry, Richard J.
    Shah, Sachit
    Simister, Robert J.
    Turner, David
    Chandratheva, Arvind
    Werring, David J.
    [J]. JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 2020, 91 (08) : 889 - 891
  • [9] Common Nodes of Virus-Host Interaction Revealed Through an Integrated Network Analysis
    Bosl, Korbinian
    Ianevski, Aleksandr
    Than, Thoa T.
    Andersen, Petter I.
    Kuivanen, Suvi
    Teppor, Mona
    Zusinaite, Eva
    Dumpis, Uga
    Vitkauskiene, Astra
    Cox, Rebecca J.
    Kallio-Kokko, Hannimari
    Bergqvist, Anders
    Tenson, Tanel
    Merits, Andres
    Oksenych, Valentyn
    Bjoras, Magnar
    Anthonsen, Marit W.
    Shum, David
    Kaarbo, Mari
    Vapalahti, Olli
    Windisch, Marc P.
    Superti-Furga, Giulio
    Snijder, Berend
    Kainov, Denis
    Kandasamy, Richard K.
    [J]. FRONTIERS IN IMMUNOLOGY, 2019, 10
  • [10] Healthspan Maintenance and Prevention of Parkinson's-like Phenotypes with Hydroxytyrosol and Oleuropein Aglycone in C. elegans
    Brunetti, Giovanni
    Di Rosa, Gabriele
    Scuto, Maria
    Leri, Manuela
    Stefani, Massimo
    Schmitz-Linneweber, Christian
    Calabrese, Vittorio
    Saul, Nadine
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020, 21 (07)