Variable selection for high-dimensional quadratic Cox model with application to Alzheimer's disease

被引:3
|
作者
Li, Cong [1 ,2 ]
Sun, Jianguo [3 ]
机构
[1] Jilin Univ, Ctr Appl Stat Res, Sch Math, Changchun, Jilin, Peoples R China
[2] Northeast Normal Univ, Key Lab Appl Stat MOE, Sch Math & Stat, Changchun, Jilin, Peoples R China
[3] Univ Missouri, Dept Stat, Columbia, MO 65211 USA
关键词
partial likelihood; penalized approach; proportional hazards model; RAMP algorithm; NONCONCAVE PENALIZED LIKELIHOOD; PROPORTIONAL HAZARDS MODEL; GENE INTERACTIONS; ADAPTIVE LASSO;
D O I
10.1515/ijb-2019-0121
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
This paper discusses variable or covariate selection for high-dimensional quadratic Cox model. Although many variable selection methods have been developed for standard Cox model or high-dimensional standard Cox model, most of them cannot be directly applied since they cannot take into account the important and existing hierarchical model structure. For the problem, we present a penalized log partial likelihood-based approach and in particular, generalize the regularization algorithm under marginality principle (RAMP) proposed in Hao et al. (J Am Stat Assoc 2018;113:615-25) under the context of linear models. An extensive simulation study is conducted and suggests that the presented method works well in practical situations. It is then applied to an Alzheimer's Disease study that motivated this investigation.
引用
收藏
页数:10
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