Schemes of flux control in a model of Saccharomyces cerevisiae glycolysis

被引:77
作者
Pritchard, L [1 ]
Kell, DB [1 ]
机构
[1] Univ Wales, Inst Biol Sci, Aberystwyth SY23 3DD, Dyfed, Wales
来源
EUROPEAN JOURNAL OF BIOCHEMISTRY | 2002年 / 269卷 / 16期
关键词
yeast; metabolic control analysis; glycolysis; modelling; flux;
D O I
10.1046/j.1432-1033.2002.03055.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We used parameter scanning to emulate changes to the limiting rate for steps in a fitted model of glucose-derepressed yeast glycolysis. Three flux-control regimes were observed, two of which were under the dominant control of hexose transport, in accordance with various experimental studies and other model predictions. A third control regime in which phosphofructokinase exerted dominant glycolytic flux con-trol was also found, but it appeared to be physiologically unreachable by this model, and all realistically obtainable flux control regimes featured hexose transport as a step involving high flux control.
引用
收藏
页码:3894 / 3904
页数:11
相关论文
共 54 条
[1]  
[Anonymous], ADV BIOCH ENG BIOTEC
[2]  
[Anonymous], 1989, MULTIVARIATE CALIBRA
[3]   Metabolic control analysis of glycolysis in trypanosomes as an approach to improve selectivity and effectiveness of drugs [J].
Bakker, BM ;
Westerhoff, HV ;
Opperdoes, FR ;
Michels, PAM .
MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 2000, 106 (01) :1-10
[4]   What controls glycolysis in bloodstream form Trypanosoma brucei? [J].
Bakker, BM ;
Michels, PAM ;
Opperdoes, FR ;
Westerhoff, HV .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (21) :14551-14559
[5]   Compartmentation protects trypanosomes from the dangerous design of glycolysis [J].
Bakker, BM ;
Mensonides, FIC ;
Teusink, B ;
van Hoek, P ;
Michels, PAM ;
Westerhoff, HV .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (05) :2087-2092
[6]   Contribution of glucose transport to the control of the glycolytic flux in Trypanosoma brucei [J].
Bakker, BM ;
Walsh, MC ;
ter Kuile, BH ;
Mensonides, FIC ;
Michels, PAM ;
Opperdoes, FR ;
Westerhoff, HV .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (18) :10098-10103
[7]   Robustness in simple biochemical networks [J].
Barkai, N ;
Leibler, S .
NATURE, 1997, 387 (6636) :913-917
[8]   How yeast cells synchronize their glycolytic oscillations: A perturbation analytic treatment [J].
Bier, M ;
Bakker, BM ;
Westerhoff, HV .
BIOPHYSICAL JOURNAL, 2000, 78 (03) :1087-1093
[9]   DESIGN OF GLYCOLYSIS [J].
BOITEUX, A ;
HESS, B .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES, 1981, 293 (1063) :5-22
[10]  
CIRIACY M, 1997, YEAST SUGAR METABOLI, P45