Structure of SARS-CoV-2 ORF8, a rapidly evolving immune evasion protein

被引:168
作者
Flower, Thomas G. [1 ,2 ]
Buffalo, Cosmo Z. [1 ,2 ]
Hooy, Richard M. [1 ,2 ]
Allaire, Marc [3 ]
Ren, Xuefeng [1 ,2 ]
Hurley, James H. [1 ,2 ,3 ]
机构
[1] Univ Calif Berkeley, Dept Mol & Cell Biol, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Calif Inst Quantitat Biosci, Berkeley, CA 94720 USA
[3] Lawrence Berkeley Natl Lab, Mol Biophys & Integrated Bioimaging Div, Berkeley, CA 94720 USA
关键词
X-ray crystallography; SARS-CoV-2; COVID-19; CORONAVIRUS;
D O I
10.1073/pnas.2021785118
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The molecular basis for the severity and rapid spread of the COVID-19 disease caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is largely unknown. ORF8 is a rapidly evolving accessory protein that has been proposed to interfere with immune responses. The crystal structure of SARS-CoV-2 ORF8 was determined at 2.04-angstrom resolution by X-ray crystallography. The structure reveals a similar to 60-residue core similar to SARS-CoV-2 ORF7a, with the addition of two dimerization interfaces unique to SARS-CoV-2 ORF8. A covalent disulfide-linked dimer is formed through an N-terminal sequence specific to SARS-CoV-2, while a separate noncovalent interface is formed by another SARS-CoV-2-specific sequence, 73YIDI76. Together, the presence of these interfaces shows how SARS-CoV-2 ORF8 can form unique large-scale assemblies not possible for SARS-CoV, potentially mediating unique immune suppression and evasion activities.
引用
收藏
页数:6
相关论文
共 27 条
[21]   SARS-CoV-2 ORF8 and SARS-CoV ORF8ab: Genomic Divergence and Functional Convergence [J].
Mohammad, Sameer ;
Bouchama, Abderrezak ;
Alharbi, Bothina Mohammad ;
Rashid, Mamoon ;
Khatlani, Tanveer Saleem ;
Gaber, Nusaibah S. ;
Malik, Shuja Shafi .
PATHOGENS, 2020, 9 (09) :1-26
[22]   Attenuation of replication by a 29 nucleotide deletion in SARS-coronavirus acquired during the early stages of human-to-human transmission [J].
Muth, Doreen ;
Corman, Victor Max ;
Roth, Hanna ;
Binger, Tabea ;
Dijkman, Ronald ;
Gottula, Lina Theresa ;
Gloza-Rausch, Florian ;
Balboni, Andrea ;
Battilani, Mara ;
Rihtaric, Danijela ;
Toplak, Ivan ;
Ameneiros, Ramon Seage ;
Pfeifer, Alexander ;
Thiel, Volker ;
Drexler, Jan Felix ;
Mueller, Marcel Alexander ;
Drosten, Christian .
SCIENTIFIC REPORTS, 2018, 8
[23]   Structure and intracellular targeting of the SARS-coronavirus Orf7a accessory protein [J].
Nelson, CA ;
Pekosz, A ;
Lee, CA ;
Diamond, MS ;
Fremont, DH .
STRUCTURE, 2005, 13 (01) :75-85
[24]   Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2 [J].
Su, Yvonne C. F. ;
Anderson, Danielle E. ;
Young, Barnaby E. ;
Linster, Martin ;
Zhu, Feng ;
Jayakumar, Jayanthi ;
Zhuang, Yan ;
Kalimuddin, Shirin ;
Low, Jenny G. H. ;
Tan, Chee Wah ;
Chia, Wan Ni ;
Mak, Tze Minn ;
Octavia, Sophie ;
Chavatte, Jean-Marc ;
Lee, Raphael T. C. ;
Pada, Surinder ;
Tan, Seow Yen ;
Sun, Louisa ;
Yan, Gabriel Z. ;
Maurer-Stroh, Sebastian ;
Mendenhall, Ian H. ;
Leo, Yee-Sin ;
Lye, David Chien ;
Wang, Lin-Fa ;
Smith, Gavin J. D. .
MBIO, 2020, 11 (04) :1-9
[25]   Novel Immunoglobulin Domain Proteins Provide Insights into Evolution and Pathogenesis of SARS-CoV-2-Related Viruses [J].
Tan, Yongjun ;
Schneider, Theresa ;
Leong, Matthew ;
Aravind, L. ;
Zhang, Dapeng .
MBIO, 2020, 11 (03)
[26]   Effects of a major deletion in the SARS-CoV-2 genome on the severity of infection and the inflammatory response: an observational cohort study [J].
Young, Barnaby E. ;
Fong, Siew-Wai ;
Chan, Yi-Hao ;
Mak, Tze-Minn ;
Ang, Li Wei ;
Anderson, Danielle E. ;
Lee, Cheryl Yi-Pin ;
Amrun, Siti Naqiah ;
Lee, Bernett ;
Goh, Yun Shan ;
Su, Yvonne C. F. ;
Wei, Wycliffe E. ;
Kalimuddin, Shirin ;
Chai, Louis Yi Ann ;
Pada, Surinder ;
Tan, Seow Yen ;
Sun, Louisa ;
Parthasarathy, Purnima ;
Chen, Yuan Yi Constance ;
Barkham, Timothy ;
Lin, Raymond Tzer Pin ;
Maurer-Stroh, Sebastian ;
Leo, Yee-Sin ;
Wang, Lin-Fa ;
Renia, Laurent ;
Lee, Vernon J. ;
Smith, Gavin J. D. ;
Lye, David Chien ;
Ng, Lisa F. P. .
LANCET, 2020, 396 (10251) :603-611
[27]  
Zhang S, 2020, CANCER IMMUNOL RES, V8, P24