Prospective motion correction in functional MRI using simultaneous multislice imaging and multislice-to-volume image registration

被引:16
作者
Hoinkiss, Daniel Christopher [1 ]
Erhard, Peter [1 ,2 ]
Breutigam, Nora-Josefin [1 ]
van Samson-Himmelstjerna, Federico [1 ]
Guenther, Matthias [1 ,2 ]
Porter, David Andrew [3 ]
机构
[1] Fraunhofer Inst Digital Med MEVIS, Bremen, Germany
[2] Univ Bremen, Bremen, Germany
[3] Univ Glasgow, Coll Med Vet & Life Sci, Imaging Ctr Excellence, Glasgow, Lanark, Scotland
关键词
Prospective motion correction; Simultaneous multislice (SMS); Multislice-to-volume; Image registration; EPI; Functional MRI; Real-time MRI sequences; BOLD; Kalman filter; HUMAN BRAIN; ARTIFACT REDUCTION; TIME; EPI; ACQUISITION; TRACKING; PET; CT;
D O I
10.1016/j.neuroimage.2019.06.042
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
The sensitivity to subject motion is one of the major challenges in functional MRI (fMRI) studies in which a precise alignment of images from different time points is required to allow reliable quantification of brain activation throughout the scan. Especially the long measurement times and laborious fMRI tasks add to the amount of subject motion found in typical fMRI measurements, even when head restraints are used. In case of moving subjects, prospective motion correction can maintain the relationship between spatial image information and subject anatomy by constantly adapting the image slice positioning to follow the subject in real time. Image-based prospective motion correction is well-established in fMRI studies and typically computes the motion estimates based on a volume-to-volume image registration, resulting in low temporal resolution. This study combines fMRI using simultaneous multislice imaging with multislice-to-volume-based image registration to allow sub-TR motion detection with subsequent real-time adaption of the imaging system. Simultaneous multislice imaging is widely used in fMRI studies and, together with multislice-to-volume-based image registration algorithms, enables computing suitable motion states after only a single readout by registering the simultaneously excited slices to a reference volume acquired at the start of the measurement. The technique is evaluated in three human BOLD fMRI studies (n = 1, 5, and 1) to explore different aspects of the method. It is compared to conventional, volume-tovolume-based prospective motion correction as well as retrospective motion correction methods. Results show a strong reduction in retrospectively computed residual motion parameters of up to 50% when comparing the two prospective motion correction techniques. An analysis of temporal signal-to-noise ratio as well as brain activation results shows high consistency between the results before and after additional retrospective motion correction when using the proposed technique, indicating successful prospective motion correction. The comparison of absolute tSNR values does not show an improvement compared to using retrospective motion correction alone. However, the improved temporal resolution may provide improved tSNR in the presence of more exaggerated intra-volume motion.
引用
收藏
页码:159 / 173
页数:15
相关论文
共 45 条
  • [21] Prospective motion correction improves the sensitivity of fMRI pattern decoding
    Huang, Pei
    Carlin, Johan D.
    Alink, Arjen
    Kriegeskorte, Nikolaus
    Henson, Richard N.
    Correia, Marta M.
    [J]. HUMAN BRAIN MAPPING, 2018, 39 (10) : 4018 - 4031
  • [22] Improved optimization for the robust and accurate linear registration and motion correction of brain images
    Jenkinson, M
    Bannister, P
    Brady, M
    Smith, S
    [J]. NEUROIMAGE, 2002, 17 (02) : 825 - 841
  • [23] Kalman RE., 1960, Trans. ASME Ser. D. J. Basic Engrg, V82, P35, DOI [10.1115/1.3662552, DOI 10.1115/1.3662552]
  • [24] DYNAMIC MAGNETIC-RESONANCE-IMAGING OF HUMAN BRAIN ACTIVITY DURING PRIMARY SENSORY STIMULATION
    KWONG, KK
    BELLIVEAU, JW
    CHESLER, DA
    GOLDBERG, IE
    WEISSKOFF, RM
    PONCELET, BP
    KENNEDY, DN
    HOPPEL, BE
    COHEN, MS
    TURNER, R
    CHENG, HM
    BRADY, TJ
    ROSEN, BR
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (12) : 5675 - 5679
  • [25] Larkman DJ, 2001, J MAGN RESON IMAGING, V13, P313, DOI 10.1002/1522-2586(200102)13:2<313::AID-JMRI1045>3.0.CO
  • [26] 2-W
  • [27] Maclaren J, 2009, P 17 SCI M INT SOC M, P4602
  • [28] Prospective motion correction in brain imaging: A review
    Maclaren, Julian
    Herbst, Michael
    Speck, Oliver
    Zaitsev, Maxim
    [J]. MAGNETIC RESONANCE IN MEDICINE, 2013, 69 (03) : 621 - 636
  • [29] MULTI-PLANAR IMAGE-FORMATION USING NMR SPIN ECHOES
    MANSFIELD, P
    [J]. JOURNAL OF PHYSICS C-SOLID STATE PHYSICS, 1977, 10 (03): : L55 - L58
  • [30] PET-CT image registration in the chest using free-form deformations
    Mattes, D
    Haynor, DR
    Vesselle, H
    Lewellen, TK
    Eubank, W
    [J]. IEEE TRANSACTIONS ON MEDICAL IMAGING, 2003, 22 (01) : 120 - 128