Lessons from miR-143/145: the importance of cell-type localization of miRNAs

被引:158
作者
Kent, Oliver A. [1 ]
McCall, Matthew N. [2 ]
Cornish, Toby C. [3 ]
Halushka, Marc K. [3 ]
机构
[1] Univ Toronto, Univ Hlth Network, Princess Margaret Canc Ctr, Toronto, ON M5G IL7, Canada
[2] Univ Rochester, Dept Biostat, Rochester, NY 14642 USA
[3] Johns Hopkins Univ, Dept Pathol, Baltimore, MD 21205 USA
关键词
MICRORNA EXPRESSION; TUMOR-SUPPRESSOR; CANCER; GENES; INVASION; PATTERNS; MIR-126; ADENOCARCINOMA; IDENTIFICATION; PROLIFERATION;
D O I
10.1093/nar/gku461
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
miR-143 and miR-145 are co-expressed microRNAs (miRNAs) that have been extensively studied as potential tumor suppressors. These miRNAs are highly expressed in the colon and are consistently reported as being downregulated in colorectal and other cancers. Through regulation of multiple targets, they elicit potent effects on cancer cell growth and tumorigenesis. Importantly, a recent discovery demonstrates that miR-143 and miR-145 are not expressed in colonic epithelial cells; rather, these two miRNAs are highly expressed in mesenchymal cells such as fibroblasts and smooth muscle cells. The expression patterns of miR-143 and miR-145 and other miRNAs were initially determined from tissue level data without consideration that multiple different cell types, each with their own unique miRNA expression patterns, make up each tissue. Herein, we discuss the early reports on the identification of dysregulated miR-143 and miR-145 expression in colorectal cancer and how lack of consideration of cellular composition of normal tissue led to the misconception that these miRNAs are downregulated in cancer. We evaluate mechanistic data from miR-143/145 studies in context of their cell type-restricted expression pattern and the potential of these miRNAs to be considered tumor suppressors. Further, we examine other examples of miRNAs being investigated in inappropriate cell types modulating pathways in a non-biological fashion. Our review highlights the importance of determining the cellular expression pattern of each miRNA, so that downstream studies are conducted in the appropriate cell type.
引用
收藏
页码:7528 / 7538
页数:11
相关论文
共 73 条
  • [31] Treatment of HCV Infection by Targeting MicroRNA
    Janssen, Harry L. A.
    Reesink, Hendrik W.
    Lawitz, Eric J.
    Zeuzem, Stefan
    Rodriguez-Torres, Maribel
    Patel, Keyur
    van der Meer, Adriaan J.
    Patick, Amy K.
    Chen, Alice
    Zhou, Yi
    Persson, Robert
    King, Barney D.
    Kauppinen, Sakari
    Levin, Arthur A.
    Hodges, Michael R.
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 2013, 368 (18) : 1685 - 1694
  • [32] Modulation of hepatitis C virus RNA abundance by a liver-specific microRNA
    Jopling, CL
    Yi, MK
    Lancaster, AM
    Lemon, SM
    Sarnow, P
    [J]. SCIENCE, 2005, 309 (5740) : 1577 - 1581
  • [33] RREB1 repressed miR-143/145 modulates KRAS signaling through downregulation of multiple targets
    Kent, O. A.
    Fox-Talbot, K.
    Halusha, M. K.
    [J]. ONCOGENE, 2013, 32 (20) : 2576 - 2585
  • [34] Repression of the miR-143/145 cluster by oncogenic Ras initiates a tumor-promoting feed-forward pathway
    Kent, Oliver A.
    Chivukula, Raghu R.
    Mullendore, Michael
    Wentzel, Erik A.
    Feldmann, Georg
    Lee, Kwang H.
    Liu, Shu
    Leach, Steven D.
    Maitra, Anirban
    Mendell, Joshua T.
    [J]. GENES & DEVELOPMENT, 2010, 24 (24) : 2754 - 2759
  • [35] A resource for analysis of microRNA expression and function in pancreatic ductal adenocarcinoma cells
    Kent, Oliver A.
    Mullendore, Michael
    Wentzel, Eric A.
    Lopez-Romero, Pedro
    Tan, Aik Choon
    Alvarez, Hector
    West, Kristen
    Ochs, Michael F.
    Hidalgo, Manuel
    Arking, Dan E.
    Maitra, Anirban
    Mendell, Joshua T.
    [J]. CANCER BIOLOGY & THERAPY, 2009, 8 (21) : 2013 - 2024
  • [36] miRBase: integrating microRNA annotation and deep-sequencing data
    Kozomara, Ana
    Griffiths-Jones, Sam
    [J]. NUCLEIC ACIDS RESEARCH, 2011, 39 : D152 - D157
  • [37] Combinatorial microRNA target predictions
    Krek, A
    Grun, D
    Poy, MN
    Wolf, R
    Rosenberg, L
    Epstein, EJ
    MacMenamin, P
    da Piedade, I
    Gunsalus, KC
    Stoffel, M
    Rajewsky, N
    [J]. NATURE GENETICS, 2005, 37 (05) : 495 - 500
  • [38] Role of dicer and drosha for endothelial MicroRNA expression and angiogenesis
    Kuehbacher, Angelika
    Urbich, Carmen
    Zeiher, Andreas M.
    Dimmeler, Stefanie
    [J]. CIRCULATION RESEARCH, 2007, 101 (01) : 59 - 68
  • [39] A mammalian microRNA expression atlas based on small RNA library sequencing
    Landgraf, Pablo
    Rusu, Mirabela
    Sheridan, Robert
    Sewer, Alain
    Iovino, Nicola
    Aravin, Alexei
    Pfeffer, Sebastien
    Rice, Amanda
    Kamphorst, Alice O.
    Landthaler, Markus
    Lin, Carolina
    Socci, Nicholas D.
    Hermida, Leandro
    Fulci, Valerio
    Chiaretti, Sabina
    Foa, Robin
    Schliwka, Julia
    Fuchs, Uta
    Novosel, Astrid
    Mueller, Roman-Ulrich
    Schermer, Bernhard
    Bissels, Ute
    Inman, Jason
    Phan, Quang
    Chien, Minchen
    Weir, David B.
    Choksi, Ruchi
    De Vita, Gabriella
    Frezzetti, Daniela
    Trompeter, Hans-Ingo
    Hornung, Veit
    Teng, Grace
    Hartmann, Gunther
    Palkovits, Miklos
    Di Lauro, Robert
    Wernet, Peter
    Macino, Giuseppe
    Rogler, Charles E.
    Nagle, James W.
    Ju, Jingyue
    Papavasiliou, F. Nina
    Benzing, Thomas
    Lichter, Peter
    Tam, Wayne
    Brownstein, Michael J.
    Bosio, Andreas
    Borkhardt, Arndt
    Russo, James J.
    Sander, Chris
    Zavolan, Mihaela
    [J]. CELL, 2007, 129 (07) : 1401 - 1414
  • [40] Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    Lewis, BP
    Burge, CB
    Bartel, DP
    [J]. CELL, 2005, 120 (01) : 15 - 20