Mumia flava gen. nov., sp nov., an actinobacterium of the family Nocardioidaceae

被引:40
作者
Lee, Learn-Han [1 ]
Zainal, Nurullhudda [1 ,2 ]
Azman, Adzzie-Shazleen [1 ]
Ab Mutalib, Nurul-Syakima [3 ]
Hong, Kui [4 ]
Chan, Kok-Gan [2 ]
机构
[1] Monash Univ, Jeffrey Cheah Sch Med & Hlth Sci, Bandar Sunway 46150, Selangor Darul, Malaysia
[2] Univ Malaya, Fac Sci, Inst Biol Sci, Div Genet & Mol Biol, Kuala Lumpur 50603, Malaysia
[3] UKM Med Ctr, UKM Med Mol Biol Inst UMBI, Kuala Lumpur 56000, Malaysia
[4] Wuhan Univ, Sch Pharmaceut Sci, Minist Educ, Key Lab Combinatory Biosynth & Drug Discovery, Wuhan 430072, Peoples R China
关键词
COMB-NOV; AEROMICROBIUM; CHROMATOGRAPHY; ACID; CLASSIFICATION; ACTINOMYCETE; SEQUENCES; SELECTION; BACTERIA; TREES;
D O I
10.1099/ijs.0.058701-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel actinobacterial strain, designated MUSC 201(T), was isolated from a mangrove soil collected from Kuantan, the capital city of Pahang State in Malaysia The taxonomic status of this strain was determined using a polyphasic approach. Comparative 16S rRNA gene sequence analysis revealed that strain MUSC 201(T) represented a novel lineage within the class Actinobacteria. Strain MUSC 201(T) formed a distinct clade in the family Nocardioidaceae and was most closely related to the members of the genera Nocardioides (16S rRNA gene sequence similarity, 91.9-95.1%), Aeromicrobium (92.7-94.6%), Marmoricola (92.5-93.1 %) and Kribbella (91.5-92.4%). The cells of this strain were irregular coccoid to short rod shaped. The peptidoglycan contained LL-diaminopimelic acid as diagnostic diamino acid and the peptidoglycan type was A3 gamma. The peptidoglycan cell wall contained LL-diaminopimelic acid, glycine, glutamic acid and alanine in a molar ratio of 1.5 :0.9 :1.0 :1.5. The cell-wall sugars were galactose and rhamnose. The predominant menaquinone was MK-9(H-4). The polar lipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphoglycolipid, glycolipid and four unknown phospholipids. The major cellular fatty acids Were C-18:1 omega 9c(30.8 %), C-16:0 (24.1 7), and 10-methyl C-18:0 (13.0 %). The DNA G+C content was 72.0 +/- 0.1 mol%. On the basis of phylogenetic and phenotypic differences from members of the genera of the family Nocardioidaceae, a novel genus and species, Mumia [lava gen. nov., sp. nov. are proposed. The type strain of Mumia flava is MUSC 201(T) (=DSM 27763(T)=MCCC 1A00646(T)=NBRC 109973(T)).
引用
收藏
页码:1461 / 1467
页数:7
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