DNA polymerase λ from calf thymus preferentially replicates damaged DNA

被引:65
作者
Ramadan, K
Shevelev, IV
Maga, G
Hübscher, U
机构
[1] Univ Zurich Irchel, Inst Vet Biochem & Mol Biol, CH-8057 Zurich, Switzerland
[2] Petersburg Nucl Phys Inst, Dept Mol & Radiat Biophys, Gatchina 188300, Russia
[3] CNR, Ist Genet Mol, I-27100 Pavia, Italy
关键词
D O I
10.1074/jbc.M200421200
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A new gene (POLL), has been identified encoding the novel DNA polymerase lambda and mapped to mouse chromosome 19 and at human chromosome 10. DNA polymerase lambda contains all the critical residues involved in DNA binding, nucleotide binding, nucleotide selection, and catalysis of DNA polymerization and has been assigned to family X based on sequence homology with polymerase beta, lambda, mu, and terminal deoxynucleotidyltransferase. Here we describe a purification of DNA polymerase lambda from calf thymus that preferentially can replicate damaged DNA. By testing polymerase activity on non-damaged and damaged DNA, DNA polymerase lambda was purified trough five chromatographic steps to near homogeneity and identified as a 67-kDa polypeptide that cross-reacted with monoclonal antibodies against DNA polymerase beta and polyclonal antibodies against DNA polymerase lambda. DNA polymerase lambda had no detectable nuclease activities and, in contrast to DNA polymerase beta, was aphidicolin-sensitive. DNA polymerase lambda was a 6-fold more accurate enzyme in an M13mp2 forward mutation assay and 5-fold more accurate in an M13mp2T90 reversion system than human recombinant DNA polymerase beta. The biochemical properties of the calf thymus DNA polymerase lambda, described here for the first time, are discussed in relationship to the proposed role for this DNA polymerase in vivo.
引用
收藏
页码:18454 / 18458
页数:5
相关论文
共 18 条
[1]   A superfamily of conserved domains in DNA damage responsive cell cycle checkpoint proteins [J].
Bork, P ;
Hofmann, K ;
Bucher, P ;
Neuwald, AF ;
Altschul, SF ;
Koonin, EV .
FASEB JOURNAL, 1997, 11 (01) :68-76
[2]   DNA polymerase mu (Pol μ), homologous to TdT, could act as a DNA mutator in eukaryotic cells [J].
Domínguez, O ;
Ruiz, JF ;
de Lera, TL ;
García-Díaz, M ;
González, MA ;
Kirchhoff, T ;
Martínez-A, C ;
Bernad, A ;
Blanco, L .
EMBO JOURNAL, 2000, 19 (07) :1731-1742
[3]   DNA polymerase λ, a novel DNA repair enzyme in human cells [J].
García-Díaz, M ;
Bebenek, K ;
Sabariegos, R ;
Domínguez, O ;
Rodríguez, J ;
Kirchhoff, T ;
Garcia-Palomero, E ;
Picher, AJ ;
Juárez, R ;
Ruiz, JF ;
Kunkel, TA ;
Blanco, L .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (15) :13184-13191
[4]   Identification of an intrinsic 5′-deoxyribose-5-phosphate lyase activity in human DNA polymerase λ -: A possible role in base excision repair [J].
García-Díaz, M ;
Bebenek, K ;
Kunkel, TA ;
Blanco, L .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (37) :34659-34663
[5]   DNA polymerase lambda (Pol λ), a novel eukaryotic DNA polymerase with a potential role in meiosis [J].
García-Díaz, M ;
Domínguez, O ;
López-Fernández, LA ;
de Lera, LT ;
Saníger, ML ;
Ruiz, JF ;
Párraga, M ;
García-Ortiz, MJ ;
Kirchhoff, T ;
del Mazo, J ;
Bernad, A ;
Blanco, L .
JOURNAL OF MOLECULAR BIOLOGY, 2000, 301 (04) :851-867
[6]   A human DNA editing enzyme homologous to the Escherichia coli DnaQ/MutD protein [J].
Höss, M ;
Robins, P ;
Naven, TJP ;
Pappin, DJC ;
Sgouros, J ;
Lindahl, T .
EMBO JOURNAL, 1999, 18 (13) :3868-3875
[7]   Eukaryotic DNA polymerases [J].
Hübscher, U ;
Maga, G ;
Spadari, S .
ANNUAL REVIEW OF BIOCHEMISTRY, 2002, 71 :133-163
[8]   DNA replication fidelity [J].
Kunkel, TA ;
Bebenek, R .
ANNUAL REVIEW OF BIOCHEMISTRY, 2000, 69 :497-529
[9]   MUTATIONAL SPECIFICITY OF DEPURINATION [J].
KUNKEL, TA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (05) :1494-1498
[10]   CLEAVAGE OF STRUCTURAL PROTEINS DURING ASSEMBLY OF HEAD OF BACTERIOPHAGE-T4 [J].
LAEMMLI, UK .
NATURE, 1970, 227 (5259) :680-+