X chromosome regulation: diverse patterns in development, tissues and disease

被引:222
作者
Deng, Xinxian [1 ]
Berletch, Joel B. [1 ]
Nguyen, Di K. [1 ]
Disteche, Christine M. [1 ,2 ]
机构
[1] Univ Washington, Sch Med, Dept Pathol, Seattle, WA 98195 USA
[2] Univ Washington, Sch Med, Dept Med, Seattle, WA 98115 USA
基金
美国国家卫生研究院;
关键词
LONG NONCODING RNAS; DOSAGE-COMPENSATION; INACTIVE X; SEX-DIFFERENCES; LINKED GENES; MAMMALIAN X; DNA METHYLATION; UP-REGULATION; XIST RNA; MOUSE;
D O I
10.1038/nrg3687
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Genes on the mammalian X chromosome are present in one copy in mates and two copies in females. The complex mechanisms that regulate the X chromosome lead to evolutionary and physiological variability in gene expression between species, the sexes, individuals, developmental stages, tissues and cell types. In early development, delayed and incomplete X chromosome inactivation (XCI) in some species causes variability in gene expression. Additional diversity stems from escape from XCI and from mosaicism or XCI skewing in females. This causes sex-specific differences that manifest as differential gene expression and associated phenotypes. Furthermore, the complexity and diversity of X dosage regulation affect the severity of diseases caused by X-linked mutations.
引用
收藏
页码:367 / 378
页数:12
相关论文
共 127 条
  • [31] Evolutionary diversity and developmental regulation of X-chromosome inactivation
    Escamilla-Del-Arenal, Martin
    da Rocha, Simao Teixeira
    Heard, Edith
    [J]. HUMAN GENETICS, 2011, 130 (02) : 307 - 327
  • [32] Boundaries between chromosomal domains of X inactivation and escape bind CTCF and lack CpG methylation during early development
    Filippova, GN
    Cheng, MK
    Moore, JM
    Truong, JP
    Hu, YJ
    Nguyen, DK
    Tsuchiya, KD
    Disteche, CM
    [J]. DEVELOPMENTAL CELL, 2005, 8 (01) : 31 - 42
  • [33] Epigenetic Functions of Smchd1 Repress Gene Clusters on the Inactive X Chromosome and on Autosomes
    Gendrel, Anne-Valerie
    Tang, Y. Amy
    Suzuki, Masako
    Godwin, Jonathan
    Nesterova, Tatyana B.
    Greally, John M.
    Heard, Edith
    Brockdorff, Neil
    [J]. MOLECULAR AND CELLULAR BIOLOGY, 2013, 33 (16) : 3150 - 3165
  • [34] Smchd1-Dependent and -Independent Pathways Determine Developmental Dynamics of CpG Island Methylation on the Inactive X Chromosome
    Gendrel, Anne-Valerie
    Apedaile, Anwyn
    Coker, Heather
    Termanis, Ausma
    Zvetkova, Ilona
    Godwin, Jonathan
    Tang, Y. Amy
    Huntley, Derek
    Montana, Giovanni
    Taylor, Steven
    Giannoulatou, Eleni
    Heard, Edith
    Stancheva, Irina
    Brockdorff, Neil
    [J]. DEVELOPMENTAL CELL, 2012, 23 (02) : 265 - 279
  • [35] Age-dependent skewing of X chromosome inactivation appears delayed in centenarians' offspring. Is there a role for allelic imbalance in Healthy Aging and Longevity?
    Gentilini, Davide
    Castaldi, Davide
    Mari, Daniela
    Monti, Daniela
    Franceschi, Claudio
    Di Blasio, Anna Maria
    Vitale, Giovanni
    [J]. AGING CELL, 2012, 11 (02): : 277 - 283
  • [36] Multilocus loss of DNA methylation in individuals with mutations in the histone H3 Lysine 4 Demethylase KDM5C
    Grafodatskaya, Daria
    Chung, Barian H. Y.
    Butcher, Darci T.
    Turinsky, Andrei L.
    Goodman, Sarah J.
    Choufani, Sana
    Chen, Yi-An
    Lou, Youliang
    Zhao, Chunhua
    Rajendram, Rageen
    Abidi, Fatima E.
    Skinner, Cindy
    Stavropoulos, James
    Bondy, Carolyn A.
    Hamilton, Jill
    Wodak, Shoshana
    Scherer, Stephen W.
    Schwartz, Charles E.
    Weksberg, Rosanna
    [J]. BMC MEDICAL GENOMICS, 2013, 6
  • [37] Rsx is a metatherian RNA with Xist-like properties in X-chromosome inactivation
    Grant, Jennifer
    Mahadevaiah, Shantha K.
    Khil, Pavel
    Sangrithi, Mahesh N.
    Royo, Helene
    Duckworth, Janine
    McCarrey, John R.
    VandeBerg, John L.
    Renfree, Marilyn B.
    Taylor, Willie
    Elgar, Greg
    Camerini-Otero, R. Daniel
    Gilchrist, Mike J.
    Turner, James M. A.
    [J]. NATURE, 2012, 487 (7406) : 254 - U1511
  • [38] The mutational landscape of lethal castration-resistant prostate cancer
    Grasso, Catherine S.
    Wu, Yi-Mi
    Robinson, Dan R.
    Cao, Xuhong
    Dhanasekaran, Saravana M.
    Khan, Amjad P.
    Quist, Michael J.
    Jing, Xiaojun
    Lonigro, Robert J.
    Brenner, J. Chad
    Asangani, Irfan A.
    Ateeq, Bushra
    Chun, Sang Y.
    Siddiqui, Javed
    Sam, Lee
    Anstett, Matt
    Mehra, Rohit
    Prensner, John R.
    Palanisamy, Nallasivam
    Ryslik, Gregory A.
    Vandin, Fabio
    Raphael, Benjamin J.
    Kunju, Lakshmi P.
    Rhodes, Daniel R.
    Pienta, Kenneth J.
    Chinnaiyan, Arul M.
    Tomlins, Scott A.
    [J]. NATURE, 2012, 487 (7406) : 239 - 243
  • [39] Sex chromosome specialization and degeneration in mammals
    Graves, JAM
    [J]. CELL, 2006, 124 (05) : 901 - 914
  • [40] The rise and fall of SRY
    Graves, JAM
    [J]. TRENDS IN GENETICS, 2002, 18 (05) : 259 - 264