Widespread and persistent populations of a major new marine actinomycete taxon in ocean sediments

被引:421
作者
Mincer, TJ [1 ]
Jensen, PR [1 ]
Kauffman, CA [1 ]
Fenical, W [1 ]
机构
[1] Univ Calif San Diego, Scripps Inst Oceanog, Ctr Marine Biotechnol & Biomed, La Jolla, CA 92093 USA
关键词
D O I
10.1128/AEM.68.10.5005-5011.2002
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A major taxon of obligate marine bacteria within the order Actinomycetales has been discovered from ocean sediments. Populations of these bacteria (designated MAR 1) are persistent and widespread, spanning at least three distinct ocean systems. In this study, 212 actinomycete isolates possessing MAR 1 morphologies were examined and all but two displayed an obligate requirement of seawater for growth. Forty-five of these isolates, representing all observed seawater-requiring morphotypes, were partially sequenced and found to share characteristic small-subunit rRNA signature nucleotides between positions 207 and 468 (Escherichia coli numbering). Phylogenetic characterization of seven representative isolates based on almost complete sequences of genes encoding 16S rRNA (16S ribosomal DNA) yielded a monophyletic clade within the family Micromonosporaceae and suggests novelty at the genus level. This is the first evidence for the existence of widespread populations of obligate marine actinomycetes. Organic extracts from cultured members of this new group exhibit remarkable biological activity, suggesting that they represent a prolific resource for biotechnological applications.
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页码:5005 / 5011
页数:7
相关论文
共 30 条
[21]  
SIEBURTH JM, 1979, SEA MICROBES
[22]   Proposal for a new hierarchic classification system, Actinobacteria classis nov [J].
Stackebrandt, E ;
Rainey, FA ;
WardRainey, NL .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1997, 47 (02) :479-491
[23]   ISOLATION AND DIVERSITY OF ACTINOMYCETES IN THE CHESAPEAKE BAY [J].
TAKIZAWA, M ;
COLWELL, RR ;
HILL, RT .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1993, 59 (04) :997-1002
[24]   A new genus of the order Actinomycetales, Virgosporangium gen. nov., with descriptions of Virgosporangium ochraceum sp nov and Virgosporangium aurantiacum sp nov. [J].
Tamura, T ;
Hayakawa, M ;
Hatano, K .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2001, 51 :1809-1816
[25]   CLUSTAL-W - IMPROVING THE SENSITIVITY OF PROGRESSIVE MULTIPLE SEQUENCE ALIGNMENT THROUGH SEQUENCE WEIGHTING, POSITION-SPECIFIC GAP PENALTIES AND WEIGHT MATRIX CHOICE [J].
THOMPSON, JD ;
HIGGINS, DG ;
GIBSON, TJ .
NUCLEIC ACIDS RESEARCH, 1994, 22 (22) :4673-4680
[26]  
Waksman SA, 1940, P SOC EXP BIOL MED, V45, P609
[27]   ACTINOMYCETES IN NORTH SEA AND ATLANTIC OCEAN SEDIMENTS [J].
WEYLAND, H .
NATURE, 1969, 223 (5208) :858-&
[28]  
Weyland H, 1981, ZBL BAKT S, V11, P185
[29]  
Williams ST., 1984, The biology of the actinomycetes, P481
[30]   BACTERIAL EVOLUTION [J].
WOESE, CR .
MICROBIOLOGICAL REVIEWS, 1987, 51 (02) :221-271