METTL14 Gene Polymorphisms Confer Neuroblastoma Susceptibility: An Eight-Center Case-Control Study

被引:52
作者
Zhuo, Zhenjian [1 ]
Lu, Hongting [2 ]
Zhu, Jinhong [1 ,3 ]
Hua, Rui-Xi [1 ]
Li, Yong [4 ]
Yang, Zhonghua [5 ]
Zhang, Jiao [6 ]
Cheng, Jiwen [7 ]
Zhou, Haixia [8 ,9 ]
Li, Suhong [10 ,11 ]
Li, Li [12 ]
Xia, Huimin [1 ]
He, Jing [1 ]
机构
[1] Guangzhou Med Univ, Guangdong Prov Key Lab Res Struct Birth Defect Di, Guangzhou Women & Childrens Med Ctr, Dept Pediat Surg,Guangzhou Inst Pediat, 9 Jinsui Rd, Guangzhou 510623, Guangdong, Peoples R China
[2] Qingdao Univ, Affiliated Hosp, Dept Pediat Surg, Qingdao 266000, Shandong, Peoples R China
[3] Harbin Med Univ, Canc Hosp, Biobank, Dept Clin Lab, Harbin 150040, Heilongjiang, Peoples R China
[4] Hunan Childrens Hosp, Dept Pediat Surg, Changsha 410004, Hunan, Peoples R China
[5] China Med Univ, Shengjing Hosp, Dept Pediat Surg, Shenyang 110004, Liaoning, Peoples R China
[6] Zhengzhou Univ, Affiliated Hosp 1, Dept Pediat Surg, Zhengzhou 450052, Henan, Peoples R China
[7] Xi An Jiao Tong Univ, Affiliated Hosp 2, Dept Pediat Surg, Xian 710004, Shaanxi, Peoples R China
[8] Wenzhou Med Univ, Affiliated Hosp 2, Dept Hematol, Wenzhou 325027, Zhejiang, Peoples R China
[9] Wenzhou Med Univ, Yuying Childrens Hosp, Wenzhou 325027, Zhejiang, Peoples R China
[10] Children Hosp, Dept Pathol, Taiyuan 030013, Shannxi, Peoples R China
[11] Women Hlth Ctr Shanxi, Taiyuan 030013, Shannxi, Peoples R China
[12] Kunming Childrens Hosp, Kunming Key Lab Children Infect & Immun, Yunnan Key Lab Childrens Major Dis Res, Yunnan Inst Pediat Res,Yunnan Med Ctr Pediat Dis, Kunming 650228, Yunnan, Peoples R China
来源
MOLECULAR THERAPY-NUCLEIC ACIDS | 2020年 / 22卷
关键词
case-control study; m[!sup]6[!/sup]A; METTL14; neuroblastoma; polymorphism;
D O I
10.1016/j.omtn.2020.08.009
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Neuroblastoma is the primary cause of cancer death in childhood. METTL14 is tightly linked to cancer. However, whether single-nucleotide polymorphisms (SNPs) in the METTL14 gene could predispose to neuroblastoma susceptibility lacks evidence. With an epidemiology case-control study, associations between METTL14 gene SNPs and overall risk for neuroblastoma were estimated in 898 cases and 1,734 controls. Following that, stratified analysis was performed. Among the five analyzed SNPs, rs298982 G>A and rs62328061 A>G exhibited a significant association with decreased susceptibility to neuroblastoma, whereas the associations with increased neuroblastoma susceptibility were observed for rs9884978 G>A and rs4834698 T>C. Moreover, subjects carrying two to five risk genotypes were more inclined to develop neuroblastoma than those with zero to one risk genotypes. The stratified analysis further demonstrated the protective effect of rs298982 G>A and rs62328061 A>G, as well as the predisposing effect of rs4834698 T>C and two to five risk genotypes, in certain subgroups. Haplotype analysis was performed. Moreover, false positive report probability analysis validated the reliability of the significant results. The expression quantitative trait locus analysis revealed that rs298982 is correlated with the expression levels of its surrounding genes. Our results suggest that some SNPs in the METTL14 gene are associated with predisposition to neuroblastoma.
引用
收藏
页码:17 / 26
页数:10
相关论文
共 55 条
[1]   Haplotypes vs single marker linkage disequilibrium tests:: what do we gain? (Reprinted European Journal of Human Genetics, Vol 4, pg 291-300, 2001) [J].
Akey, Joshua ;
Jin, Li ;
Xiong, Momiao .
EUROPEAN JOURNAL OF HUMAN GENETICS, 2017, 25 :S51-S58
[2]   Integrative discovery of treatments for high-risk neuroblastoma [J].
Almstedt, Elin ;
Elgendy, Ramy ;
Hekmati, Neda ;
Rosen, Emil ;
Warn, Caroline ;
Olsen, Thale Kristin ;
Dyberg, Cecilia ;
Doroszko, Milena ;
Larsson, Ida ;
Sundstrom, Anders ;
Henriksson, Marie Arsenian ;
Pahlman, Sven ;
Bexell, Daniel ;
Vanlandewijck, Michael ;
Kogner, Per ;
Jornsten, Rebecka ;
Krona, Cecilia ;
Nelander, Sven .
NATURE COMMUNICATIONS, 2020, 11 (01)
[3]   Frequency of ALK and GD2 Expression in Neuroblastoma [J].
Aygun, Zeynep ;
Batur, Sebnem ;
Emre, Senol ;
Celkan, Tiraje ;
Ozman, Oktay ;
Comunoglu, Nil .
FETAL AND PEDIATRIC PATHOLOGY, 2019, 38 (04) :326-334
[4]  
Bao Ping-Ping, 2013, Zhonghua Er Ke Za Zhi, V51, P288
[5]   Genetic Predisposition to Neuroblastoma [J].
Barr, Erin K. ;
Applebaum, Mark A. .
CHILDREN-BASEL, 2018, 5 (09)
[6]   REVISIONS OF THE INTERNATIONAL CRITERIA FOR NEUROBLASTOMA DIAGNOSIS, STAGING, AND RESPONSE TO TREATMENT [J].
BRODEUR, GM ;
PRITCHARD, J ;
BERTHOLD, F ;
CARLSEN, NLT ;
CASTEL, V ;
CASTLEBERRY, RP ;
DEBERNARDI, B ;
EVANS, AE ;
FAVROT, M ;
HEDBORG, F ;
KANEKO, M ;
KEMSHEAD, J ;
LAMPERT, F ;
LEE, REJ ;
LOOK, AT ;
PEARSON, ADJ ;
PHILIP, T ;
ROALD, B ;
SAWADA, T ;
SEEGER, RC ;
TSUCHIDA, Y ;
VOUTE, PA .
JOURNAL OF CLINICAL ONCOLOGY, 1993, 11 (08) :1466-1477
[7]   Recent advances in dynamic m6A RNA modification [J].
Cao, Guangchao ;
Li, Hua-Bing ;
Yin, Zhinan ;
Flavell, Richard A. .
OPEN BIOLOGY, 2016, 6 (04)
[8]   The functional variant rs34330 of CDKN1B is associated with risk of neuroblastoma [J].
Capasso, Mario ;
McDaniel, Lee D. ;
Cimmino, Flora ;
Cirino, Andrea ;
Formicola, Daniela ;
Russell, Mike R. ;
Raman, Pichai ;
Cole, Kristina A. ;
Diskin, Sharon J. .
JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2017, 21 (12) :3224-3230
[9]   Common Genetic Variants in NEFL Influence Gene Expression and Neuroblastoma Risk [J].
Capasso, Mario ;
Diskin, Sharon ;
Cimmino, Flora ;
Acierno, Giovanni ;
Totaro, Francesca ;
Petrosino, Giuseppe ;
Pezone, Lucia ;
Diamond, Maura ;
McDaniel, Lee ;
Hakonarson, Hakon ;
Iolascon, Achille ;
Devoto, Marcella ;
Maris, John M. .
CANCER RESEARCH, 2014, 74 (23) :6913-6924
[10]   The Genotype-Tissue Expression (GTEx) Project [J].
Carithers, Latarsha J. ;
Moore, Helen M. .
BIOPRESERVATION AND BIOBANKING, 2015, 13 (05) :307-308