Theory and applications of NMR-based screening in pharmaceutical research

被引:238
作者
Lepre, CA
Moore, JM
Peng, JW
机构
[1] Vertex Pharmaceut Inc, Cambridge, MA 02139 USA
[2] Univ Notre Dame, Dept Chem & Biochem, Notre Dame, IN 46556 USA
关键词
D O I
10.1021/cr030409h
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Over the years, the advent of NMR-driven platforms have provided new pathways for inhibitor design against an increasing number of therapeutically relevant drug targets. This review covers both the theoretical and practical considerations for the most commonly used NMR-based screening approaches. First, the theoretical aspects of chemical exchange phenomena that lay at the foundation of NMR screening experiments are discussed. Second, a detailed description of commonly used ligand and receptor-based NMR approaches and their implementation in the laboratory is given. Finally, a framework based on common ligand design strategies is used to review examples of how NMR methods have been applied to generate and optimize new chemical classes of ligands for real drug targets.
引用
收藏
页码:3641 / 3675
页数:35
相关论文
共 138 条
  • [1] [Anonymous], 1987, Introduction to Modern Statistical Mechanics
  • [2] [Anonymous], 1985, Enzyme Structure and Mechanism
  • [3] Rational design, synthesis, and verification of affinity ligands to a protein surface cleft
    Baumann, H
    Öhrman, S
    Shinohara, Y
    Ersoy, O
    Choudhury, D
    Axén, A
    Tedebark, U
    Carredano, E
    [J]. PROTEIN SCIENCE, 2003, 12 (04) : 784 - 793
  • [4] Virus-ligand interactions:: Identification and characterization of ligand binding by NMR spectroscopy
    Benie, AJ
    Moser, R
    Bäuml, E
    Blaas, D
    Peters, T
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (01) : 14 - 15
  • [5] Novel inhibitors of DNA gyrase: 3D structure based biased needle screening, hit validation by biophysical methods, and 3D guided optimization. A promising alternative to random screening
    Boehm, HJ
    Boehringer, M
    Bur, D
    Gmuender, H
    Huber, W
    Klaus, W
    Kostrewa, D
    Kuehne, H
    Luebbers, T
    Meunier-Keller, N
    [J]. JOURNAL OF MEDICINAL CHEMISTRY, 2000, 43 (14) : 2664 - 2674
  • [6] Protein-protein association kinetics and protein docking
    Camacho, CJ
    Vajda, S
    [J]. CURRENT OPINION IN STRUCTURAL BIOLOGY, 2002, 12 (01) : 36 - 40
  • [7] EFFECTS OF DIFFUSION ON FREE PRECESSION IN NUCLEAR MAGNETIC RESONANCE EXPERIMENTS
    CARR, HY
    PURCELL, EM
    [J]. PHYSICAL REVIEW, 1954, 94 (03): : 630 - 638
  • [8] Structure-based screening of low-affinity compounds
    Carr, R
    Jhoti, H
    [J]. DRUG DISCOVERY TODAY, 2002, 7 (09) : 522 - 527
  • [9] Nuclear overhauser effect on diffusion measurements
    Chen, A
    Shapiro, M
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (22) : 5338 - 5339
  • [10] NOE pumping. 2. A high-throughput method to determine compounds with binding affinity to macromolecules by NMR
    Chen, AD
    Shapiro, MJ
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (02) : 414 - 415