Mechanisms underlying mutational signatures in human cancers

被引:610
作者
Helleday, Thomas [1 ]
Eshtad, Saeed [1 ]
Nik-Zainal, Serena [2 ,3 ]
机构
[1] Karolinska Inst, Dept Med Biochem & Biophys, Div Translat Med & Chem Biol, Sci Life Lab, S-17121 Stockholm, Sweden
[2] Wellcome Trust Sanger Inst, Cambridge CB10 1SA, England
[3] Cambridge Univ Hosp, NHS Trust, East Anglian Med Genet Serv, Cambridge CB2 2QQ, England
基金
英国惠康基金;
关键词
STRAND-BREAK REPAIR; ONCOGENE-INDUCED SENESCENCE; DNA-DAMAGE RESPONSE; HOMOLOGOUS RECOMBINATION; SOMATIC MUTATIONS; MISMATCH-REPAIR; CHROMOSOMAL TRANSLOCATIONS; MICROSATELLITE INSTABILITY; DEOXYRIBONUCLEIC-ACID; CYTOSINE DEAMINATION;
D O I
10.1038/nrg3729
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The collective somatic mutations observed in a cancer are the outcome of multiple mutagenic processes that have been operative over the lifetime of a patient. Each process leaves a characteristic imprint - a mutational signature - on the cancer genome, which is defined by the type of DNA damage and DNA repair processes that result in base substitutions, insertions and deletions or structural variations. With the advent of whole-genome sequencing, researchers are identifying an increasing array of these signatures. Mutational signatures can be used as a physiological readout of the biological history of a cancer and also have potential use for discerning ongoing mutational processes from historical ones, thus possibly revealing new targets for anticancer therapies.
引用
收藏
页码:585 / 598
页数:14
相关论文
共 114 条
[41]   A Common Cancer-Associated DNA Polymerase ε Mutation Causes an Exceptionally Strong Mutator Phenotype, Indicating Fidelity Defects Distinct from Loss of Proofreading [J].
Kane, Daniel P. ;
Shcherbakova, Polina V. .
CANCER RESEARCH, 2014, 74 (07) :1895-1901
[42]   Microsatellite instability and DNA mismatch repair in human cancer [J].
Karran, P .
SEMINARS IN CANCER BIOLOGY, 1996, 7 (01) :15-24
[43]   HYPOXANTHINE IN DEOXYRIBONUCLEIC-ACID - GENERATION BY HEAT-INDUCED HYDROLYSIS OF ADENINE RESIDUES AND RELEASE IN FREE FORM BY A DEOXYRIBONUCLEIC-ACID GLYCOSYLASE FROM CALF THYMUS [J].
KARRAN, P ;
LINDAHL, T .
BIOCHEMISTRY, 1980, 19 (26) :6005-6011
[44]   Replication of Damaged Genomes [J].
Klarer, Alden C. ;
McGregor, W. Glenn .
CRITICAL REVIEWS IN EUKARYOTIC GENE EXPRESSION, 2011, 21 (04) :323-336
[45]   Translocation-Capture Sequencing Reveals the Extent and Nature of Chromosomal Rearrangements in B Lymphocytes [J].
Klein, Isaac A. ;
Resch, Wolfgang ;
Jankovic, Mila ;
Oliveira, Thiago ;
Yamane, Arito ;
Nakahashi, Hirotaka ;
Di Virgilio, Michela ;
Bothmer, Anne ;
Nussenzweig, Andre ;
Robbiani, Davide F. ;
Casellas, Rafael ;
Nussenzweig, Michel C. .
CELL, 2011, 147 (01) :95-106
[46]   Translesion DNA synthesis in the context of cancer research [J].
Knobel, Philip A. ;
Marti, Thomas M. .
CANCER CELL INTERNATIONAL, 2011, 11
[47]  
Krokan HE, 1997, BIOCHEM J, V325, P1
[48]   DNA damage-induced mutation: tolerance via translesion synthesis [J].
Kunz, BA ;
Straffon, AFL ;
Vonarx, EJ .
MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS, 2000, 451 (1-2) :169-185
[49]   Tumor-associated Apc mutations in Mlh1-/- Apc1638N mice reveal a mutational signature of Mlh1 deficiency [J].
Kuraguchi, M ;
Edelmann, W ;
Yang, K ;
Lipkin, M ;
Kucherlapati, R ;
Brown, AMC .
ONCOGENE, 2000, 19 (50) :5755-5763
[50]   APOBEC3A can activate the DNA damage response and cause cell-cycle arrest [J].
Landry, Sebastien ;
Narvaiza, Inigo ;
Linfesty, Daniel C. ;
Weitzman, Matthew D. .
EMBO REPORTS, 2011, 12 (05) :444-450