Architecture of the Vibrio cholerae toxin-coregulated pilus machine revealed by electron cryotomography

被引:42
作者
Chang, Yi-Wei [1 ]
Kjaer, Andreas [2 ]
Ortega, Davi R. [1 ]
Kovacikova, Gabriela [3 ]
Sutherland, John A. [3 ]
Rettberg, Lee A. [4 ]
Taylor, Ronald K. [3 ]
Jensen, Grant J. [1 ,4 ]
机构
[1] CALTECH, Pasadena, CA 91125 USA
[2] Univ Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark
[3] Geisel Sch Med Dartmouth, Hanover, NH 03755 USA
[4] Howard Hughes Med Inst, Pasadena, CA 91125 USA
来源
NATURE MICROBIOLOGY | 2017年 / 2卷 / 04期
关键词
ENTEROTOXIGENIC ESCHERICHIA-COLI; INNER MEMBRANE PLATFORM; SECRETION ATPASE GSPE; MINOR PILIN COFB; IV PILUS; COLONIZATION FACTOR; GENE-CLUSTER; BIOGENESIS APPARATUS; THERMUS-THERMOPHILUS; CYTOPLASMIC DOMAIN;
D O I
10.1038/nmicrobiol.2016.269
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Type IV pili (T4P) are filamentous appendages found on many Bacteria and Archaea. They are helical fibres of pilin proteins assembled by a multi-component macromolecular machine we call the basal body. Based on pilin features, T4P are classified into type IVa pili (T4aP) and type IVb pili (T4bP)(1,2). T4aP are more widespread and are involved in cell motility(3), DNA transfer(4), host predation(5) and electron transfer(6). T4bP are less prevalent and are mainly found in enteropathogenic bacteria, where they play key roles in host colonization(7). Following similar work on T4aP machines(8,9), here we use electron cryotomography(10) to reveal the three-dimensional in situ structure of a T4bP machine in its piliated and non-piliated states. The specific machine we analyse is the Vibrio cholerae toxin-coregulated pilus machine (TCPM). Although only about half of the components of the TCPM show sequence homology to components of the previously analysed Myxococcus xanthus T4aP machine (T4aPM), we find that their structures are nevertheless remarkably similar. Based on homologies with components of the M. xanthus T4aPM and additional reconstructions of TCPM mutants in which the non-homologous proteins are individually deleted, we propose locations for all eight TCPM components within the complex. Non-homologous proteins in the T4aPM and TCPM are found to form similar structures, suggesting new hypotheses for their functions and evolutionary histories.
引用
收藏
页数:7
相关论文
共 60 条
  • [1] The X-ray structure of the type II secretion system complex formed by the N-terminal domain of EpsE and the cytoplasmic domain of EpsL of Vibrio cholerae
    Abendroth, J
    Murphy, P
    Sandkvist, M
    Bagdasarian, M
    Holl, WGJ
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2005, 348 (04) : 845 - 855
  • [2] The three-dimensional structure of the cytoplasmic domains of EpsF from the type 2 secretion system of Vibrio cholerae
    Abendroth, Jan
    Mitchell, Daniel D.
    Korotkov, Konstantin V.
    Johnson, Tanya L.
    Kreger, Allison
    Sandkvist, Maria
    Hol, Wim G. J.
    [J]. JOURNAL OF STRUCTURAL BIOLOGY, 2009, 166 (03) : 303 - 315
  • [3] CDvist: a webserver for identification and visualization of conserved domains in protein sequences
    Adebali, Ogun
    Ortega, Davi R.
    Zhulin, Igor B.
    [J]. BIOINFORMATICS, 2015, 31 (09) : 1475 - 1477
  • [4] Fast tomographic reconstruction on multicore computers
    Agulleiro, J. I.
    Fernandez, J. J.
    [J]. BIOINFORMATICS, 2011, 27 (04) : 582 - 583
  • [5] Structure and Assembly of a Trans-Periplasmic Channel for Type IV Pili in Neisseria meningitidis
    Berry, Jamie-Lee
    Phelan, Marie M.
    Collins, Richard F.
    Adomavicius, Tomas
    Tonjum, Tone
    Frye, Stefan A.
    Bird, Louise
    Owens, Ray
    Ford, Robert C.
    Lian, Lu-Yun
    Derrick, Jeremy P.
    [J]. PLOS PATHOGENS, 2012, 8 (09)
  • [6] The Type IV Pilus Assembly ATPase PilB of Myxococcus xanthus Interacts with the Inner Membrane Platform Protein PilC and the Nucleotide-binding Protein PilM
    Bischof, Lisa Franziska
    Friedrich, Carmen
    Harms, Andrea
    Sogaard-Andersen, Lotte
    van der Does, Chris
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2016, 291 (13) : 6946 - 6957
  • [7] Identification of a TcpC-TcpQ outer membrane complex involved in the biogenesis of the toxin-coregulated pilus of Vibrio cholerae
    Bose, N
    Taylor, RK
    [J]. JOURNAL OF BACTERIOLOGY, 2005, 187 (07) : 2225 - 2232
  • [8] BLAST plus : architecture and applications
    Camacho, Christiam
    Coulouris, George
    Avagyan, Vahram
    Ma, Ning
    Papadopoulos, Jason
    Bealer, Kevin
    Madden, Thomas L.
    [J]. BMC BIOINFORMATICS, 2009, 10
  • [9] Architecture of the type IVa pilus machine
    Chang, Yi-Wei
    Rettberg, Lee A.
    Treuner-Lange, Anke
    Iwasa, Janet
    Sogaard-Andersen, Lotte
    Jensen, Grant J.
    [J]. SCIENCE, 2016, 351 (6278)
  • [10] DNA uptake during bacterial transformation
    Chen, I
    Dubnau, D
    [J]. NATURE REVIEWS MICROBIOLOGY, 2004, 2 (03) : 241 - 249