A stochastic model for kinesin bidirectional stepping

被引:2
|
作者
Yao, Xiaojun [1 ,2 ]
Zheng, Yujun [1 ]
机构
[1] Shandong Univ, Sch Phys, Jinan 250100, Peoples R China
[2] Shandong Univ, Taishan Coll, Jinan 250100, Peoples R China
来源
JOURNAL OF CHEMICAL PHYSICS | 2014年 / 140卷 / 08期
基金
美国国家科学基金会;
关键词
HAND-OVER-HAND; DOUBLE-HEADED BINDING; KINETIC MECHANISM; LOADING DIRECTION; MOLECULAR MOTORS; 8-NM STEP; MICROTUBULE; HYDROLYZES; MOTILITY; RATCHETS;
D O I
10.1063/1.4865934
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In this paper, a hand-over-hand stochastic model for the dynamics of the conventional kinesin is constructed. In the model, both forward and backward motions are taken into consideration. First passage time distributions, average velocities, dwell times, and forward/backward step ratios are investigated based on the model. A good agreement between the results of the model and experimental data is achieved under a variety of external loads. (C) 2014 AIP Publishing LLC.
引用
收藏
页数:8
相关论文
共 50 条
  • [21] Extending bidirectional chart parsing with a stochastic model
    Ageno, A
    Rodriguez, H
    TEXT, SPEECH AND DIALOGUE, PROCEEDINGS, 2000, 1902 : 21 - 26
  • [22] Molecular Mechanism of Processive Stepping of Kinesin Motors
    Xie, Ping
    SYMMETRY-BASEL, 2021, 13 (10):
  • [23] A Generalized Kinetic Model for Coupling between Stepping and ATP Hydrolysis of Kinesin Molecular Motors
    Xie, Ping
    Guo, Si-Kao
    Chen, Hong
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 20 (19)
  • [24] Bidirectional Power Stroke by Ncd Kinesin
    Butterfield, Anthony E.
    Stewart, Russell J.
    Schmidt, Christoph F.
    Skliar, Mikhail
    BIOPHYSICAL JOURNAL, 2010, 99 (12) : 3905 - 3915
  • [25] STEPPING-STONE MODEL AND A STOCHASTIC DIFFERENTIAL-EQUATION
    SHIMIZU, A
    ADVANCES IN APPLIED PROBABILITY, 1979, 11 (02) : 293 - 294
  • [26] Alternate fast and slow stepping of a heterodimeric kinesin molecule
    Kaseda, K
    Higuchi, H
    Hirose, K
    NATURE CELL BIOLOGY, 2003, 5 (12) : 1079 - 1082
  • [27] Mechanical control of the directional stepping dynamics of the kinesin motor
    Hyeon, Changbong
    Onuchic, Jose N.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (44) : 17382 - 17387
  • [28] Alternate fast and slow stepping of a heterodimeric kinesin molecule
    Kaseda, K
    Higuchi, H
    Hirose, K
    BIOPHYSICAL JOURNAL, 2004, 86 (01) : 409A - 409A
  • [29] Stepping behavior of two-headed kinesin motors
    Xie, Ping
    BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 2008, 1777 (09): : 1195 - 1202
  • [30] Load dependence of the stepping rate for single kinesin molecules
    Nishiyama, M
    Yanagida, T
    Higuchi, H
    BIOPHYSICAL JOURNAL, 2001, 80 (01) : 572A - 572A