Some further applications of discrete path sampling to cluster isomerization

被引:176
作者
Wales, DJ [1 ]
机构
[1] Univ Cambridge, Chem Labs, Cambridge CB2 1EW, England
关键词
D O I
10.1080/00268970410001703363
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The discrete path sampling approach is applied to analyse the dynamics of several atomic and molecular clusters. Permutational isomerization rates are first calculated for icosahedral atomic clusters containing 13 and 55 atoms. The transformation between decahedral and icosahedral morphologies of a 75-atom cluster is then investigated, for which the potential energy surface has double funnel character. The final system considered is a cluster of twenty water molecules treated using a rigid molecule pair potential. Detailed analysis of the database of stationary points produced by the initial sampling is used to investigate the accuracy of the two-state description in each case. A clear deviation from two-state behaviour occurs for (H2O)(20), where low-lying intervening minima exist.
引用
收藏
页码:891 / 908
页数:18
相关论文
共 113 条
[81]   Puddle-skimming: An efficient sampling of multidimensional configuration space [J].
Rahman, JA ;
Tully, JC .
JOURNAL OF CHEMICAL PHYSICS, 2002, 116 (20) :8750-8760
[82]   Dynamical pathways for isomerization processes in the water nonamer [J].
Rodriguez, J ;
Moriena, G ;
Laria, D .
CHEMICAL PHYSICS LETTERS, 2002, 356 (1-2) :147-152
[83]   INVESTIGATION OF THE DYNAMICS OF BENZENE IN SILICALITE USING TRANSITION-STATE THEORY [J].
SNURR, RQ ;
BELL, AT ;
THEODOROU, DN .
JOURNAL OF PHYSICAL CHEMISTRY, 1994, 98 (46) :11948-11961
[84]   Temperature-accelerated dynamics for simulation of infrequent events [J].
Sorensen, MR ;
Voter, AF .
JOURNAL OF CHEMICAL PHYSICS, 2000, 112 (21) :9599-9606
[85]   Long time dynamic simulations:: Exploring the folding pathways of an Alzheimer's amyloid Aβ-peptide [J].
Straub, JE ;
Guevara, J ;
Huo, SH ;
Lee, JP .
ACCOUNTS OF CHEMICAL RESEARCH, 2002, 35 (06) :473-481
[86]   Exploring complex networks [J].
Strogatz, SH .
NATURE, 2001, 410 (6825) :268-276
[87]   REPLICA MONTE-CARLO SIMULATION OF SPIN-GLASSES [J].
SWENDSEN, RH ;
WANG, JS .
PHYSICAL REVIEW LETTERS, 1986, 57 (21) :2607-2609
[88]  
tenWolde PR, 1996, J CHEM PHYS, V104, P9932, DOI 10.1063/1.471721
[89]   A doubly nudged elastic band method for finding transition states [J].
Trygubenko, SA ;
Wales, DJ .
JOURNAL OF CHEMICAL PHYSICS, 2004, 120 (05) :2082-2094
[90]   USE OF THE HISTOGRAM AND JUMP-WALKING METHODS FOR OVERCOMING SLOW BARRIER CROSSING BEHAVIOR IN MONTE-CARLO SIMULATIONS - APPLICATIONS TO THE PHASE-TRANSITIONS IN THE (AR)13 AND (H2O)8 CLUSTERS [J].
TSAI, CJ ;
JORDAN, KD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 99 (09) :6957-6970