Fluorescent Probes for Exploring Plant Cell Wall Deconstruction: A Review

被引:42
作者
Paes, Gabriel [1 ,2 ]
机构
[1] INRA French Natl Inst Agr Res, Fractionat AgroResources & Environm UMR0614, F-51100 Reims, France
[2] Univ Reims, Fractionat AgroResources & Environm UMR0614, F-51100 Reims, France
来源
MOLECULES | 2014年 / 19卷 / 07期
关键词
fluorescent probe; plant cell wall; lignocelluloses; microscopy; enzyme; CARBOHYDRATE-BINDING MODULES; MICROSCOPIC ANALYSIS; SURFACE-DIFFUSION; IN-VIVO; WOOD; PROTEINS; RECOVERY; MOBILITY; COLOCALIZATION; VISUALIZATION;
D O I
10.3390/molecules19079380
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Plant biomass is a potential resource of chemicals, new materials and biofuels that could reduce our dependency on fossil carbon, thus decreasing the greenhouse effect. However, due to its chemical and structural complexity, plant biomass is recalcitrant to green biological transformation by enzymes, preventing the establishment of integrated bio-refineries. In order to gain more knowledge in the architecture of plant cell wall to facilitate their deconstruction, many fluorescent probes bearing various fluorophores have been devised and used successfully to reveal the changes in structural motifs during plant biomass deconstruction, and the molecular interactions between enzymes and plant cell wall polymers. Fluorescent probes are thus relevant tools to explore plant cell wall deconstruction.
引用
收藏
页码:9380 / 9402
页数:23
相关论文
共 67 条
[1]   Real-Time Imaging of Cellulose Reorientation during Cell Wall Expansion in Arabidopsis Roots [J].
Anderson, Charles T. ;
Carroll, Andrew ;
Akhmetova, Laila ;
Somerville, Chris .
PLANT PHYSIOLOGY, 2010, 152 (02) :787-796
[2]   Access to cellulose limits the efficiency of enzymatic hydrolysis: the role of amorphogenesis [J].
Arantes, Valdeir ;
Saddler, Jack N. .
BIOTECHNOLOGY FOR BIOFUELS, 2010, 3
[3]   MOBILITY MEASUREMENT BY ANALYSIS OF FLUORESCENCE PHOTOBLEACHING RECOVERY KINETICS [J].
AXELROD, D ;
KOPPEL, DE ;
SCHLESSINGER, J ;
ELSON, E ;
WEBB, WW .
BIOPHYSICAL JOURNAL, 1976, 16 (09) :1055-1069
[4]   Seeing the wood through the trees: A review of techniques for distinguishing green fluorescent protein from endogenous autofluorescence [J].
Billinton, N ;
Knight, AW .
ANALYTICAL BIOCHEMISTRY, 2001, 291 (02) :175-197
[5]   Safranine fluorescent staining of wood cell walls [J].
Bond, J. ;
Donaldson, L. ;
Hill, S. ;
Hitchcock, K. .
BIOTECHNIC & HISTOCHEMISTRY, 2008, 83 (3-4) :161-171
[6]   Carbohydrate-binding modules: fine-tuning polysaccharide recognition [J].
Boraston, AB ;
Bolam, DN ;
Gilbert, HJ ;
Davies, GJ .
BIOCHEMICAL JOURNAL, 2004, 382 (03) :769-781
[7]   Mapping the lignin distribution in pretreated sugarcane bagasse by confocal and fluorescence lifetime imaging microscopy [J].
Coletta, Vitor Carlos ;
Rezende, Camila Alves ;
da Conceicao, Fernando Rodrigues ;
Polikarpov, Igor ;
Gontijo Guimaraes, Francisco Eduardo .
BIOTECHNOLOGY FOR BIOFUELS, 2013, 6
[8]   Both Substrate Hydrolysis and Secondary Substrate Binding Determine Xylanase Mobility as Assessed by FRAP [J].
Cuyvers, Sven ;
Hendrix, Jelle ;
Dornez, Emmie ;
Engelborghs, Yves ;
Delcour, Jan A. ;
Courtin, Christophe M. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2011, 115 (16) :4810-4817
[9]   In Situ Imaging of Single Carbohydrate-Binding Modules on Cellulose Microfibrils [J].
Dagel, Daryl J. ;
Liu, Yu-San ;
Zhong, Lanlan ;
Luo, Yonghua ;
Himmel, Michael E. ;
Xu, Qi ;
Zeng, Yining ;
Ding, Shi-You ;
Smith, Steve .
JOURNAL OF PHYSICAL CHEMISTRY B, 2011, 115 (04) :635-641
[10]   Fluorescent proteins for FRET microscopy: Monitoring protein interactions in living cells [J].
Day, Richard N. ;
Davidson, Michael W. .
BIOESSAYS, 2012, 34 (05) :341-350