A Five-Gene Signature Predicts Prognosis in Patients with Kidney Renal Clear Cell Carcinoma

被引:23
作者
Zhan, Yueping [1 ]
Guo, Wenna [1 ]
Zhang, Ying [2 ]
Wang, Qiang [3 ]
Xu, Xin-jian [4 ]
Zhu, Liucun [1 ]
机构
[1] Shanghai Univ, Sch Life Sci, Shanghai 200444, Peoples R China
[2] Yangzhou Breeding Biol Agr Technol Co Ltd, Yangzhou 225200, Peoples R China
[3] Nanjing Univ, Sch Life Sci, State Key Lab Pharmaceut Biotechnol, Nanjing 210093, Jiangsu, Peoples R China
[4] Shanghai Univ, Dept Math, Shanghai 200444, Peoples R China
基金
中国国家自然科学基金;
关键词
GENE-EXPRESSION; CANCER STATISTICS; SURVIVAL; METASTASIS; MUTATIONS; STAGE;
D O I
10.1155/2015/842784
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Kidney renal clear cell carcinoma (KIRC) is one of the most common cancers with high mortality all over the world. Many studies have proposed that genes could be used to predict prognosis in KIRC. In this study, RNA expression data from next-generation sequencing and clinical information of 523 patients downloaded from The Cancer Genome Atlas (TCGA) dataset were analyzed in order to identify the relationship between gene expression level and the prognosis of KIRC patients. A set of five genes that significantly associated with overall survival time was identified and a model containing these five genes was constructed by Cox regression analysis. By Kaplan-Meier and Receiver Operating Characteristic (ROC) analysis, we confirmed that the model had good sensitivity and specificity. In summary, expression of the five-gene model is associated with the prognosis outcomes of KIRC patients, and it may have an important clinical significance.
引用
收藏
页数:7
相关论文
共 40 条
  • [1] [Anonymous], 2013, NATURE
  • [2] Meta-analysis of Clear Cell Renal Cell Carcinoma Gene Expression Defines a Variant Subgroup and Identifies Gender Influences on Tumor Biology
    Brannon, A. Rose
    Haake, Scott M.
    Hacker, Kathryn E.
    Pruthi, Raj S.
    Wallen, Eric M.
    Nielsen, Matthew E.
    Rathmell, W. Kimryn
    [J]. EUROPEAN UROLOGY, 2012, 61 (02) : 258 - 268
  • [3] Brannon A Rose, 2010, Genes Cancer, V1, P152
  • [4] Elevation of SIPL1 (SHARPIN) Increases Breast Cancer Risk
    De Melo, Jason
    Tang, Damu
    [J]. PLOS ONE, 2015, 10 (05):
  • [5] A tumor-specific microRNA signature predicts survival in clear cell renal cell carcinoma
    Ge, Yu-Zheng
    Wu, Ran
    Xin, Hui
    Zhu, Meng
    Lu, Tian-Ze
    Liu, Hao
    Xu, Zheng
    Yu, Peng
    Zhao, You-Cai
    Li, Ming-Hao
    Hu, Zhi-Kai
    Zhao, Yan
    Zhong, Bing
    Xu, Xiao
    Zhou, Liu-Hua
    Xu, Lu-Wei
    Wu, Jian-Ping
    Li, Wen-Cheng
    Zhu, Jia-Geng
    Jia, Rui-Peng
    [J]. JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY, 2015, 141 (07) : 1291 - 1299
  • [6] Systematic Evaluation of the Prognostic Impact and Intratumour Heterogeneity of Clear Cell Renal Cell Carcinoma Biomarkers
    Gulati, Sakshi
    Martinez, Pierre
    Joshi, Tejal
    Birkbak, Nicolai Juul
    Santos, Claudio R.
    Rowan, Andrew J.
    Pickering, Lisa
    Gore, Martin
    Larkin, James
    Szallasi, Zoltan
    Bates, Paul A.
    Swanton, Charles
    Gerlinger, Marco
    [J]. EUROPEAN UROLOGY, 2014, 66 (05) : 936 - 948
  • [7] Time-dependent ROC curves for censored survival data and a diagnostic marker
    Heagerty, PJ
    Lumley, T
    Pepe, MS
    [J]. BIOMETRICS, 2000, 56 (02) : 337 - 344
  • [8] Consistency of random survival forests
    Ishwaran, Hemant
    Kogalur, Udaya B.
    [J]. STATISTICS & PROBABILITY LETTERS, 2010, 80 (13-14) : 1056 - 1064
  • [9] Somatic mutations in the notch, NF-KB, PIK3CA, and hedgehog pathways in human breast cancers
    Jiao, Xiang
    Wood, Laura D.
    Lindman, Monica
    Jones, Sian
    Buckhaults, Phillip
    Polyak, Kornelia
    Sukumar, Saraswati
    Carter, Hannah
    Kim, Dewey
    Karchin, Rachel
    Sjoblom, Tobias
    [J]. GENES CHROMOSOMES & CANCER, 2012, 51 (05) : 480 - 489
  • [10] Profilin-1 expression is associated with high grade and stage and decreased disease-free survival in renal cell carcinoma
    Karamchandani, Jason R.
    Gabril, Manal Y.
    Ibrahim, Rania
    Scorilas, Andreas
    Filter, Emily
    Finelli, Antonio
    Lee, Jason Y.
    Ordon, Michael
    Pasic, Maria
    Romaschin, Alexander D.
    Yousef, George M.
    [J]. HUMAN PATHOLOGY, 2015, 46 (05) : 673 - 680