Label-free molecular probe based on G-quadruplex and strand displacement for sensitive and selective detection and naked eye discrimination of exon 2 deletion of AIMP2

被引:3
作者
Zang, Ruimin [1 ]
Wang, Xin [2 ]
Zhu, Yanyan [1 ]
Yao, Tianming [1 ]
Shi, Shuo [1 ]
机构
[1] Tongji Univ, Biomed Multidisciplinary Innovat Res Inst, Shanghai Key Lab Chem Assessment & Sustainabil, Shanghai East Hosp,Sch Chem Sci & Engn, Shanghai, Peoples R China
[2] Shandong Inst Prevent & Treatment Endem Dis, Jinan, Shandong, Peoples R China
基金
中国国家自然科学基金;
关键词
exon 2 deletion of AIMP2; fluorescence biosensor; G-quadruplex; naked eyes; strand displacement; IRIDIUM(III) COMPLEXES; COLORIMETRIC DETECTION; ASSAY; ION; DNAZYME; PROTEIN; CANCER;
D O I
10.1111/cbdd.13406
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Exon 2 deletion of aminoacyl tRNA synthetase complex-interacting multifunctional protein 2 (AIMP2) is a genetic deletion related to various cancers, for instance ovarian and lung cancers. It can be worked as an indicator of cancer for diagnosis of diseases. Here, we developed a label-free method based on the formation of split G-quadruplex in the presence of target DNA combined with strand displacement to detect exon 2 deletion of AIMP2 (DE2) sensitively and selectively. This method is easy-operating and cost-saving. Moreover, it has observed discrimination of gene deletion from wild-types by naked eyes. The results demonstrate that this strategy can be further used for the detection of different gene deletions to achieve early diagnosis of diseases and allow better prognosis.
引用
收藏
页码:993 / 998
页数:6
相关论文
共 34 条
  • [1] Targeting G-quadruplex structures with extrinsic fluorogenic dyes: promising fluorescence sensors
    Bhasikuttan, Achikanath C.
    Mohanty, Jyotirmayee
    [J]. CHEMICAL COMMUNICATIONS, 2015, 51 (36) : 7581 - 7597
  • [2] Activity Enhancement of G-Quadruplex/Hemin DNAzyme by Flanking d(CCC)
    Chang, Tianjun
    Gong, Hongmei
    Ding, Pi
    Liu, Xiangjun
    Li, Weiguo
    Bing, Tao
    Cao, Zehui
    Shangguan, Dihua
    [J]. CHEMISTRY-A EUROPEAN JOURNAL, 2016, 22 (12) : 4015 - 4021
  • [3] Label-Free Fluorescent Copper Nanoclusters for Genotyping of Deletion and Duplication of Duchenne Muscular Dystrophy
    Chen, Chung-An
    Wang, Chun-Chi
    Jong, Yuh-Jyh
    Wu, Shou-Mei
    [J]. ANALYTICAL CHEMISTRY, 2015, 87 (12) : 6228 - 6232
  • [4] Cancer-Associated Splicing Variant of Tumor Suppressor AIMP2/p38: Pathological Implication in Tumorigenesis
    Choi, Jin Woo
    Kim, Dae Gyu
    Lee, Al-Eum
    Kim, Hye Rim
    Lee, Jin Young
    Kwon, Nam Hoon
    Shin, Young Kee
    Hwang, Soon-Kyung
    Chang, Seung-Hee
    Cho, Myung-Haing
    Choi, Yoon-La
    Kim, Jhingook
    Oh, Seung Hyun
    Kim, Bora
    Kim, Soo-Youl
    Jeon, Hyo-Sung
    Park, Jae Yong
    Kang, Hyunseok Peter
    Park, Bum Joon
    Han, Jung Min
    Kim, Sunghoon
    [J]. PLOS GENETICS, 2011, 7 (03)
  • [5] Multidirectional tumor-suppressive activity of AIMP2/p38 and the enhanced susceptibility of AIMP2 heterozygous mice to carcinogenesis
    Choi, Jin Woo
    Um, Jung Yeon
    Kundu, Joydeb Kumar
    Surh, Young-Joon
    Kim, Sunghoon
    [J]. CARCINOGENESIS, 2009, 30 (09) : 1638 - 1644
  • [6] AIMP2 promotes TNFα-dependent apoptosis via ubiquitin-mediated degradation of TRAF2
    Choi, Jin Woo
    Kim, Dae Gyu
    Park, Min Chul
    Um, Jung Yeon
    Han, Jung Min
    Park, Sang Gyu
    Choi, Eung-Chil
    Kim, Sunghoon
    [J]. JOURNAL OF CELL SCIENCE, 2009, 122 (15) : 2710 - 2715
  • [7] G-quartets 40 years later:: From 5′-GMP to molecular biology and supramolecular chemistry
    Davis, JT
    [J]. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2004, 43 (06) : 668 - 698
  • [8] Luminescent detection of nicking endonuclease Nb.BsmI activity by using a G-quadruplex-selective iridium(III) complex in aqueous solution
    Dong, Zhen-Zhen
    Lu, Lihua
    Wang, Wanhe
    Li, Guodong
    Kang, Tian-Shu
    Han, Quanbin
    Leung, Chung-Hang
    Ma, Dik-Lung
    [J]. SENSORS AND ACTUATORS B-CHEMICAL, 2017, 246 : 826 - 832
  • [9] Spontaneous and MNNG-induced reversion of an EGFP construct in HeLa cells: An assay for observing mutations in living cells by fluorescent microscopy
    Gemignani, F
    Landi, S
    DeMarini, DM
    Kole, R
    [J]. HUMAN MUTATION, 2001, 18 (06) : 526 - 534
  • [10] Design of a fluorescent DNA IMPLICATION logic gate and detection of Ag+ and cysteine with triphenylmethane dye/G-quadruplex complexes
    Guo, Jun-Hong
    Kong, De-Ming
    Shen, Han-Xi
    [J]. BIOSENSORS & BIOELECTRONICS, 2010, 26 (02) : 327 - 332