High Throughput Screening with SAMDI Mass Spectrometry for Directed Evolution

被引:19
作者
Pluchinsky, Adam J. [1 ]
Wackelin, Daniel J. [2 ]
Huang, Xiongyi [2 ]
Arnold, Frances H. [2 ]
Mrksich, Milan [1 ,3 ,4 ]
机构
[1] Northwestern Univ, Dept Biomed Engn, Evanston, IL 60208 USA
[2] CALTECH, Div Chem & Chem Engn, MC 210-41, Pasadena, CA 91125 USA
[3] Northwestern Univ, Dept Chem, 2145 Sheridan Rd, Evanston, IL 60208 USA
[4] Northwestern Univ, Dept Cell & Dev Biol, Evanston, IL 60208 USA
基金
美国国家科学基金会;
关键词
SELF-ASSEMBLED MONOLAYERS; PEPTIDE ARRAYS; ENZYMES; ASSAY;
D O I
10.1021/jacs.0c07828
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Advances in directed evolution have led to an exploration of new and important chemical transformations; however, many of these efforts still rely on the use of low-throughput chromatography-based screening methods. We present a high-throughput strategy for screening libraries of enzyme variants for improved activity. Unpurified reaction products are immobilized to a self-assembled monolayer and analyzed by mass spectrometry, allowing for direct evaluation of thousands of variants in under an hour. The method was demonstrated with libraries of randomly mutated cytochrome P411 variants to identify improved catalysts for C-H alkylation. The technique may be tailored to evolve enzymatic activity for a variety of transformations where higher throughput is needed.
引用
收藏
页码:19804 / 19808
页数:5
相关论文
共 44 条
  • [1] Measuring Drug Metabolism Kinetics and Drug-Drug Interactions Using Self-Assembled Monolayers for Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
    Anderson, Lyndsey L.
    Berns, Eric J.
    Bugga, Pradeep
    George, Alfred L., Jr.
    Mrksich, Milan
    [J]. ANALYTICAL CHEMISTRY, 2016, 88 (17) : 8604 - 8609
  • [2] High-throughput photocapture approach for reaction discovery
    Bayly, Alison A.
    McDonald, Benjamin R.
    Mrksich, Milan
    Scheidt, Karl A.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (24) : 13261 - 13266
  • [3] Bifunctional Substrate Activation via an Arginine Residue Drives Catalysis in Chalcone Isomerases
    Burke, Jason R.
    La Clair, James J.
    Philippe, Ryan N.
    Pabis, Anna
    Corbella, Marina
    Jez, Joseph M.
    Cortina, George A.
    Kaltenbach, Miriam
    Bowman, Marianne E.
    Louie, Gordon V.
    Woods, Katherine B.
    Nelson, Andrew T.
    Tawfik, Dan S.
    Kamerlin, Shina C. L.
    Noel, Joseph P.
    [J]. ACS CATALYSIS, 2019, 9 (09) : 8388 - 8396
  • [4] Storage of Information Using Small Organic Molecules
    Cafferty, Brian J.
    Ten, Alexei S.
    Fink, Michael J.
    Morey, Scott
    Preston, Daniel J.
    Mrksich, Milan
    Whitesides, George M.
    [J]. ACS CENTRAL SCIENCE, 2019, 5 (05) : 911 - 916
  • [5] CEN Y, 2019, NAT COMMUN, V10, P1, DOI DOI 10.1038/s41467-019-11155-3
  • [6] Stereodivergent Intramolecular Cyclopropanation Enabled by Engineered Carbene Transferases
    Chandgude, Ajay L.
    Ren, Xinkun
    Fasan, Rudi
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2019, 141 (23) : 9145 - 9150
  • [7] Engineering new catalytic activities in enzymes
    Chen, Kai
    Arnold, Frances H.
    [J]. NATURE CATALYSIS, 2020, 3 (03) : 203 - 213
  • [8] Profiling Protease Activity in Laundry Detergents with Peptide Arrays and SAMDI Mass Spectrometry
    Dai, Raymond
    Ten, Alexei S.
    Mrksich, Milan
    [J]. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH, 2019, 58 (25) : 10692 - 10697
  • [9] de Rond T., 2019, ANGEW CHEM, V131, P10220, DOI DOI 10.1002/ANGE.201901782
  • [10] High throughput screening of enzyme activity with mass spectrometry imaging
    de Rond, Tristan
    Danielewicz, Megan
    Northen, Trent
    [J]. CURRENT OPINION IN BIOTECHNOLOGY, 2015, 31 : 1 - 9