NUMERICAL SIMULATIONS OF KINETIC MODELS FOR CHEMOTAXIS

被引:15
作者
Filbet, Francis [1 ]
Yang, Chang [1 ]
机构
[1] Univ Lyon 1, Inst Camille Jordan, CNRS UMR5208, UL1,INSAL,ECL, F-69622 Villeurbanne, France
基金
欧洲研究理事会;
关键词
bacterial chemotaxis; chemical signaling; kinetic theory; HYPERBOLIC MODELS; BACTERIA; AGGREGATION; ADAPTATION; SCHEME; CELLS;
D O I
10.1137/130910208
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
We present a new algorithm based on a Cartesian mesh for the numerical approximation of kinetic models for chemosensitive movements set in an arbitrary geometry. We investigate the influence of the geometry on the collective behavior of bacteria described by a kinetic equation interacting with nutrients and chemoattractants. Numerical simulations are performed to verify accuracy and stability of the scheme and its ability to exhibit aggregation of cells and wave propagations. Finally, some comparisons with experiments show the robustness and accuracy of such kinetic models.
引用
收藏
页码:B348 / B366
页数:19
相关论文
共 34 条
[1]   CHEMOTAXIS IN BACTERIA [J].
ADLER, J .
SCIENCE, 1966, 153 (3737) :708-&
[3]   ADAPTATION KINETICS IN BACTERIAL CHEMOTAXIS [J].
BLOCK, SM ;
SEGALL, JE ;
BERG, HC .
JOURNAL OF BACTERIOLOGY, 1983, 154 (01) :312-323
[4]   COMPLEX PATTERNS FORMED BY MOTILE CELLS OF ESCHERICHIA-COLI [J].
BUDRENE, EO ;
BERG, HC .
NATURE, 1991, 349 (6310) :630-633
[5]  
Cercignani C., 1988, BOLTZMANN EQUATION I
[6]   A second-order positivity preserving central-upwind scheme for chemotaxis and haptotaxis models [J].
Chertock, Alina ;
Kurganov, Alexander .
NUMERISCHE MATHEMATIK, 2008, 111 (02) :169-205
[7]   Fully Discrete Analysis of a Discontinuous Finite Element Method for the Keller-Segel Chemotaxis Model [J].
Epshteyn, Yekaterina ;
Izmirlioglu, Ahmet .
JOURNAL OF SCIENTIFIC COMPUTING, 2009, 40 (1-3) :211-256
[8]   From individual to collective behavior in bacterial chemotaxis [J].
Erban, R ;
Othmer, HG .
SIAM JOURNAL ON APPLIED MATHEMATICS, 2005, 65 (02) :361-391
[9]   Approximation of hyperbolic models for chemosensitive movement [J].
Filbet, F ;
Shu, CW .
SIAM JOURNAL ON SCIENTIFIC COMPUTING, 2005, 27 (03) :850-872
[10]   Derivation of hyperbolic models for chemosensitive movement [J].
Filbet, F ;
Laurençot, P ;
Perthame, B .
JOURNAL OF MATHEMATICAL BIOLOGY, 2005, 50 (02) :189-207