Phylogeny of Abies (Pinaceae) inferred from nrITS sequence data

被引:53
作者
Xiang, Qiao-Ping [1 ]
Xiang, Qiu-Yun [2 ]
Guo, Yan-Yan [1 ,3 ]
Zhang, Xian-Chun [1 ]
机构
[1] Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 100093, Peoples R China
[2] N Carolina State Univ, Dept Plant Biol, Raleigh, NC 27695 USA
[3] Chinese Acad Sci, Grad Sch, Beijing 100039, Peoples R China
关键词
Abies; large subrepeats; nuclear ribosomal internal transcribed spacer; phylogeny; small subrepeats; NUCLEAR RIBOSOMAL DNA; INTERNAL TRANSCRIBED SPACER; NUCLEOTIDE-SEQUENCE; LENGTH VARIATION; REGION; DIFFERENTIATION; LARIX; POPULATIONS; DIVERGENCE; EVOLUTION;
D O I
10.1002/tax.581015
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Abies comprises similar to 48 species with a disjunct distribution in the Northern Hemisphere. Despite the economic and ecological importance of the genus, phylogenetic relationships among the species remain unclear. The complete nuclear ribosomal internal transcribed spacer (ITS) region was sequenced for 31 species of Abies and its outgroup Keteleeria to reconstruct the phylogeny of the genus. The results revealed three small subrepeats with a motif(5'-GGCCACCCTAGTC-3'), that is conserved across Pinaceae, and the 298 bp large subrepeats, specific to Abies occurring in all firs. Phylogenetic analysis of ITS recovered nine of the ten Formerly recognized sections (sects. Abies, Amabilis, Balsamea, Bracteata, Grandis, Momi, Nobilis, Piceaster, Pseudopicea). The results Suggest merging sect. Oiamel and Grandis. The monophyly of western North American species is Suggested with robust support by ML and MP analysis. A close relationship between European and Asian species is also inferred, but with weak support.
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收藏
页码:141 / 152
页数:12
相关论文
共 45 条
[1]   Low levels of genetic variation within and high levels of genetic differentiation among populations of species of Abies from southern Mexico and Guatemala [J].
Aguirre-Planter, E ;
Furnier, GR ;
Eguiarte, LE .
AMERICAN JOURNAL OF BOTANY, 2000, 87 (03) :362-371
[2]  
[Anonymous], 1990, PCR Protocols. A Guide to Methods and Applications
[3]   EVOLUTION OF SANTA LUCIA FIR (ABIES-BRACTEATA) ECOSYSTEM [J].
AXELROD, DI .
ANNALS OF THE MISSOURI BOTANICAL GARDEN, 1976, 63 (01) :24-41
[4]   THE ITS REGION OF NUCLEAR RIBOSOMAL DNA - A VALUABLE SOURCE OF EVIDENCE ON ANGIOSPERM PHYLOGENY [J].
BALDWIN, BG ;
SANDERSON, MJ ;
PORTER, JM ;
WOJCIECHOWSKI, MF ;
CAMPBELL, CS ;
DONOGHUE, MJ .
ANNALS OF THE MISSOURI BOTANICAL GARDEN, 1995, 82 (02) :247-277
[5]   Nuclear ribosomal DNA internal transcribed spacer 1 (ITS1) in Picea (Pinaceae):: sequence divergence and structure [J].
Campbell, CS ;
Wright, WA ;
Cox, M ;
Vining, TF ;
Major, CS ;
Arsenault, MP .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2005, 35 (01) :165-185
[6]  
Cheng W.-C., 1978, FLORA REIPUBLICAE PO, V7
[7]   Design and testing of a plant-specific PCR primer for ecological and evolutionary studies [J].
Cullings, K. W. .
MOLECULAR ECOLOGY, 1992, 1 (04) :233-240
[8]  
DOFRANCO JA, 1950, ANAIS I SUPER AGRON, V17, P1
[9]  
Engelmann G., 1878, Transactions of the Academy of Science of Saint Louis, V3, P593
[10]  
FARJON A, 1989, Notes from the Royal Botanic Garden Edinburgh, V46, P59