2D-dynamic Representation of DNA Sequences as a Graphical Tool in Bioinformatics

被引：0
作者：
Bielinska-Waz, D. [1 ]
Waz, P. [2 ]
机构：
[1] Med Univ Gdansk, Dept Radiol Informat & Stat, 15 Tuwima Str, PL-80210 Gdansk, Poland
[2] Med Univ Gdansk, Dept Nucl Med, 15 Tuwima Str, PL-80210 Gdansk, Poland
来源：
APPLICATION OF MATHEMATICS IN TECHNICAL AND NATURAL SCIENCES (AMITANS'16) | 2016年 / 1773卷
关键词：
DISTRIBUTION MOMENTS; INDICATORS;
D O I：
10.1063/1.4964979
中图分类号：
O29 [应用数学];
学科分类号：
070104 ;
摘要：
2D-dynamic representation of DNA sequences is briefly reviewed. Some new examples of 2D-dynamic graphs which are the graphical tool of the method are shown. Using the examples of the complete genome sequences of the Zika virus it is shown that the present method can be applied for the study of the evolution of viral genomes.
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页数：5
相关论文
共 19 条
[1]  
Bielinska-Waz D, 2007, AIP CONF PROC, V2, P28, DOI 10.1063/1.2836064
[2]   Statistical spectroscopy as a tool for the study of molecular similarity [J].
Bielinska-Waz, Dorota ;
Nowak, Wieslaw ;
Peplowski, Lukasz ;
Waz, Piotr ;
Basak, Subhash C. ;
Natarajan, Ramanathan .
JOURNAL OF MATHEMATICAL CHEMISTRY, 2008, 43 (04) :1560-1572
[3]   Similarity studies of DNA sequences using genetic methods [J].
Bielinska-Waz, Dorota ;
Waz, Piotr ;
Clark, Timothy .
CHEMICAL PHYSICS LETTERS, 2007, 445 (1-3) :68-73
[4]   Distribution moments of 2D-graphs as descriptors of DNA sequences [J].
Bielinska-Waz, Dorota ;
Nowak, Wieslaw ;
Waz, Piotr ;
Nandy, Ashesh ;
Clark, Timothy .
CHEMICAL PHYSICS LETTERS, 2007, 443 (4-6) :408-413
[5]   2D-dynamic representation of DNA sequences [J].
Bielinska-Waz, Dorota ;
Clark, Timothy ;
Waz, Piotr ;
Nowak, Wieslaw ;
Nandy, Ashesh .
CHEMICAL PHYSICS LETTERS, 2007, 442 (1-3) :140-144
[6]   Statistical method of generating envelopes of the electronic hot bands [J].
Bielinska-Waz, Dorota .
INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, 2015, 115 (24) :1726-1732
[7]   Graphical and numerical representations of DNA sequences: statistical aspects of similarity [J].
Bielinska-Waz, Dorota .
JOURNAL OF MATHEMATICAL CHEMISTRY, 2011, 49 (10) :2345-2407
[8]   SIMPLER DNA-SEQUENCE REPRESENTATIONS [J].
GATES, MA .
NATURE, 1985, 316 (6025) :219-219
[9]  
HAMORI E, 1983, J BIOL CHEM, V258, P1318
[10]  
IVANOV VS, 1993, OPT SPEKTROSK+, V75, P303
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