PTPN22 Single-Nucleotide Polymorphisms in Iranian Patients with Type 1 Diabetes Mellitus

被引:13
作者
Abbasi, Farzaneh [1 ]
Soltani, Samaneh [2 ]
Saghazadeh, Amene [2 ]
Soltaninejad, Ehsan [3 ]
Rezaei, Arezou [4 ]
Bidoki, Alireza Zare [2 ]
Bahrami, Tayyeb [3 ]
Amirzargar, Ali Akbar [2 ,5 ]
Rezaei, Nima [4 ,5 ,6 ]
机构
[1] Univ Tehran Med Sci, Growth & Dev Res Ctr, Childrens Med Ctr, Tehran, Iran
[2] Univ Tehran Med Sci, Mol Immunol Res Ctr, Childrens Med Ctr, Tehran, Iran
[3] Univ Tehran Med Sci, Sch Med, Dept Genet, Tehran, Iran
[4] Univ Tehran Med Sci, Res Ctr Immunodeficiencies, Childrens Med Ctr, Tehran, Iran
[5] Univ Tehran Med Sci, Dept Immunol, Sch Med, Tehran, Iran
[6] USERN, NIIMA, Tehran, Iran
关键词
PTPN22; single-nucleotide polymorphisms; type; 1; diabetes; TYROSINE-PHOSPHATASE PTPN22; JUVENILE IDIOPATHIC ARTHRITIS; GENOME-WIDE ASSOCIATION; R620W POLYMORPHISM; RHEUMATOID-ARTHRITIS; GENE POLYMORPHISM; N22; GENE; T-CELLS; DISEASE; AUTOIMMUNITY;
D O I
10.1080/08820139.2017.1288239
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Background: PTPN22 plays a crucial role in regulating the function of various cells of the immune system, particularly T cells. Polymorphisms of the PTPN22 gene have been associated with many autoimmune diseases, including type 1 diabetes (T1D) which is a T-cell-mediated disease.Objective: The present study was aimed at genotyping of an Iranian population for five polymorphisms of the PTPN22 gene.Methods: The study population consisted of 99 T1D patients and 100 healthy controls. We genotyped five single-nucleotide polymorphisms (SNPs) (rs12760457, rs1310182, rs1217414, rs33996649, and rs2476601) of the PTPN22 gene.Results: Regarding the variant rs2476601, genotypes AG and GG were increased and decreased in T1D patients compared with controls, respectively. Further, alleles G and A of this SNP were found to be decreased and increased in T1D patients, respectively (p value = 0.001). However, T1D and control groups did not differ on genotype distribution or allele frequency for other investigated SNPs.Conclusions: The PTPN22 rs2476601 minor allele (A) was associated with T1D in Iran, accounting for its pathophysiology in autoimmune diseases.
引用
收藏
页码:409 / 418
页数:10
相关论文
共 60 条
[1]   Reduced CD4+ T cell activation in children with type 1 diabetes carrying the PTPN22/Lyp 620Trp variant [J].
Aarnisalo, Johanna ;
Tresz, Andras ;
Svec, Peter ;
Marttila, Jane ;
Oling, Viveka ;
Simell, Olli ;
Knip, Mikael ;
Korner, Anna ;
Madacsy, Laszlo ;
Vasarhelyi, Bama ;
Ilonen, Jorma ;
Hermann, Robert .
JOURNAL OF AUTOIMMUNITY, 2008, 31 (01) :13-21
[2]   Analysis of PTPN22 C1858T gene polymorphism in cases with type 1 diabetes of Azerbaijan, Northwest Iran [J].
Almasi, Shohreh ;
Aliparasti, Mohammad Reza ;
Yazdchi-Marandi, Leili ;
Aliasgarzadeh, Akbar ;
Sioofy-Khojine, Amirbabak ;
Mesri, Adel ;
Zamani, Fatemeh .
CELLULAR IMMUNOLOGY, 2014, 292 (1-2) :14-18
[3]  
ANDERSEN AR, 1983, DIABETOLOGIA, V25, P496
[4]   KIR gene content diversity in four Iranian populations [J].
Ashouri, Elham ;
Farjadian, Shirin ;
Reed, Elaine F. ;
Ghaderi, Abbas ;
Rajalingam, Raja .
IMMUNOGENETICS, 2009, 61 (07) :483-492
[5]   Type 1 diabetes: new perspectives on disease pathogenesis and treatment [J].
Atkinson, MA ;
Eisenbarth, GS .
LANCET, 2001, 358 (9277) :221-229
[6]   Association of the Protein Tyrosine Phosphatase Nonreceptor 22 Haplotypes with Autoimmune Thyroid Disease in the Japanese Population [J].
Ban, Yoshiyuki ;
Tozaki, Teruaki ;
Taniyama, Matsuo ;
Nakano, Yasuko ;
Ban, Yoshihisa ;
Ban, Yoshio ;
Hirano, Tsutomu .
THYROID, 2010, 20 (08) :893-899
[7]   Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes [J].
Barrett, Jeffrey C. ;
Clayton, David G. ;
Concannon, Patrick ;
Akolkar, Beena ;
Cooper, Jason D. ;
Erlich, Henry A. ;
Julier, Cecile ;
Morahan, Grant ;
Nerup, Jorn ;
Nierras, Concepcion ;
Plagnol, Vincent ;
Pociot, Flemming ;
Schuilenburg, Helen ;
Smyth, Deborah J. ;
Stevens, Helen ;
Todd, John A. ;
Walker, Neil M. ;
Rich, Stephen S. .
NATURE GENETICS, 2009, 41 (06) :703-707
[8]   A missense single-nucleotide polymorphism in a gene encoding a protein tyrosine phosphatase (PTPN22) is associated with rheumatoid arthritis [J].
Begovich, AB ;
Carlton, VEH ;
Honigberg, LA ;
Schrodi, SJ ;
Chokkalingam, AP ;
Alexander, HC ;
Ardlie, KG ;
Huang, QQ ;
Smith, AM ;
Spoerke, JM ;
Conn, MT ;
Chang, M ;
Chang, SYP ;
Saiki, RK ;
Catanese, JJ ;
Leong, DU ;
Garcia, VE ;
McAllister, LB ;
Jeffery, DA ;
Lee, AT ;
Batliwalla, F ;
Remmers, E ;
Criswell, LA ;
Seldin, MF ;
Kastner, DL ;
Amos, CI ;
Sninsky, JJ ;
Gregersen, PK .
AMERICAN JOURNAL OF HUMAN GENETICS, 2004, 75 (02) :330-337
[9]   Genetics, pathogenesis and clinical interventions in type 1 diabetes [J].
Bluestone, Jeffrey A. ;
Herold, Kevan ;
Eisenbarth, George .
NATURE, 2010, 464 (7293) :1293-1300
[10]   Tyrosine Phosphatase PTPN22: Multifunctional Regulator of Immune Signaling, Development, and Disease [J].
Bottini, Nunzio ;
Peterson, Erik J. .
ANNUAL REVIEW OF IMMUNOLOGY, VOL 32, 2014, 32 :83-119