Modeling self-organized spatio-temporal patterns of PIP3 and PTEN during spontaneous cell polarization

被引:20
|
作者
Knoch, Fabian [1 ]
Tarantola, Marco [1 ]
Bodenschatz, Eberhard [1 ,2 ,3 ]
Rappel, Wouter-Jan [4 ]
机构
[1] Max Planck Inst Dynam & Self Org, D-37077 Gottingen, Germany
[2] Cornell Univ, Lab Atom & Solid State Phys, Ithaca, NY 14853 USA
[3] Cornell Univ, Sibley Sch Mech & Aerosp Engn, Ithaca, NY 14853 USA
[4] Univ Calif San Diego, Dept Phys, La Jolla, CA 92093 USA
基金
美国国家卫生研究院;
关键词
chemotaxis; polarization; modeling; LIPID SIGNALING SYSTEM; EUKARYOTIC CHEMOTAXIS; DICTYOSTELIUM CELLS; WAVES; MIGRATION; POLARITY; MECHANISMS; EMERGENCE; PATHWAYS; MOTILITY;
D O I
10.1088/1478-3975/11/4/046002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
During spontaneous cell polarization of Dictyostelium discoideum cells, phosphatidylinositol (3,4,5)-triphoshpate (PIP3) and PTEN (phosphatase tensin homolog) have been identified as key signaling molecules which govern the process of polarization in a self-organized manner. Recent experiments have quantified the spatio-temporal dynamics of these signaling components. Surprisingly, it was found that membrane-bound PTEN can be either in a high or low state, that PIP3 waves were initiated in areas lacking PTEN through an excitable mechanism, and that PIP3 was degraded even though the PTEN concentration remained low. Here we develop a reaction-diffusion model that aims to explain these experimental findings. Our model contains bistable dynamics for PTEN, excitable dynamics for PIP3, and postulates the existence of two species of PTEN with different dephosphorylation rates. We show that our model is able to produce results that are in good qualitative agreement with the experiments, suggesting that our reaction-diffusion model underlies the self-organized spatio-temporal patterns observed in experiments.
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页数:8
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