Flavobacterium eburneum sp nov., isolated from reclaimed saline land soil

被引:9
作者
Hwang, Woon Mo [1 ]
Kim, Dohak [1 ]
Kang, Keunsoo [1 ]
Ahn, Tae-Young [1 ]
机构
[1] Dankook Univ, Dept Microbiol, Coll Nat Sci, Cheonan 31116, South Korea
基金
新加坡国家研究基金会;
关键词
Flavobacterium eburneum; Flovabacterium; Bacteroidetes; reclaimed saline land soil; FRESH-WATER; EMENDED DESCRIPTIONS; AQUIDURENSE; ALIGNMENT; SEDIMENT; FAMILY;
D O I
10.1099/ijsem.0.001568
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel Gram-stain-negative, motile by gliding, and aerobic bacterial strain, designated SA31T, was isolated from reclaimed saline land soil near a lake in Taean-gun, South Korea. Cells of the isolate formed ivory-coloured colonies. Growth occurred at 10-35 degrees C (optimum 25-30 degrees C), pH 6.0-9.0 (optimum pH 7.0-7.5), and 0-2.0% (w/v) NaCl (optimum 0%). Based on similarities of 16S rRNA gene sequences, strain SA31(T) was mostly affiliated with the genus Flavobacterium, exhibiting the highest sequence similarities with Flavobacterium palustre S44(T) (96.0%), Flavobacterium glycines Gm-149(T) (95.9%), Flavobacterium defluvii EMB117(T) (95.7%) and Flavobacterium daejeonense GH1- 10(T) (95.6%). Phylogenetic analysis based on 16S rRNA gene sequences also indicated that strain SA31(T) was clustered with Flavobacterium daejeonense GH1- 10(T) and Flavobacterium glycines Gm- 149(T). The predominant fatty acids (>7% of total) of strain SA31(T) were iso-C-15:0, summed feature 3 (C-16:1 omega 7c and/or C-16:1 omega 6c), iso-C-17:0 3-OH and iso-C-15:0 3-OH. The major polar lipids of the isolate comprised phosphatidylethanolamine, one unknown aminolipid, one unknown glycolipid, one unknown aminophospholipid and three unknown lipids. The major respiratory quinone was MK-6. The genomic DNA G+C content of strain SA31(T) was 33.5 mol%. On the basis of phenotypic, chemotaxonomic and phylogenetic analyses, strain SA31(T) represents a novel species the genus Flavobacterium, for which the name Flavobacterium eburneum sp. nov. is proposed. The type strain is SA31(T) (=KACC 18743(T) =JCM 31221T
引用
收藏
页码:55 / 59
页数:5
相关论文
共 36 条
  • [1] BASIC LOCAL ALIGNMENT SEARCH TOOL
    ALTSCHUL, SF
    GISH, W
    MILLER, W
    MYERS, EW
    LIPMAN, DJ
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) : 403 - 410
  • [2] STUDY OF A BACTERIOPHAGE INFECTING THE MYXOBACTERIUM CHONDROCOCCUS-COLUMNARIS
    ANACKER, RL
    ORDAL, EJ
    [J]. JOURNAL OF BACTERIOLOGY, 1955, 70 (06) : 738 - 741
  • [3] [Anonymous], NUCL ACID TECHNIQUES
  • [4] [Anonymous], USDA AGR MONOGRAPH
  • [5] [Anonymous], 2011, BERGEYS MANUAL SYSTE
  • [6] Flavobacterium granuli sp nov., isolated from granules used in a wastewater treatment plant
    Aslam, Z
    Im, WT
    Kim, MK
    Lee, ST
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 : 747 - 751
  • [7] Barrow GI., 1993, COWAN STEELS MANUAL, V3th
  • [8] BAUER AW, 1966, AM J CLIN PATHOL, V45, P493
  • [9] Benson DA, 2010, NUCLEIC ACIDS RES, V38, pD46, DOI [10.1093/nar/gkp1024, 10.1093/nar/gkx1094, 10.1093/nar/gkl986, 10.1093/nar/gkw1070, 10.1093/nar/gks1195, 10.1093/nar/gkn723, 10.1093/nar/gkg057, 10.1093/nar/gkr1202, 10.1093/nar/gkq1079]
  • [10] Bergey DH, 1923, Bergey's Manual of Determinative Bacteriology, P97