Structural Features of the ATP-Binding Cassette (ABC) Transporter ABCA3

被引:27
作者
Paolini, Alessandro [1 ]
Baldassarre, Antonella [1 ]
Del Gaudio, Ilaria [1 ]
Masotti, Andrea [1 ]
机构
[1] Bambino Gesu Childrens Hosp IRCCS, Gene Express Microarrays Lab, I-00146 Rome, Italy
关键词
ABC transporters; ABCA3; protein model; SECONDARY STRUCTURE PREDICTION; FATAL SURFACTANT DEFICIENCY; ESCHERICHIA-COLI; LIPID TRANSPORT; II CELLS; PULMONARY SURFACTANT; RESPIRATORY-FAILURE; MEMBRANE-PROTEIN; LAMELLAR BODIES; P-GLYCOPROTEIN;
D O I
10.3390/ijms160819631
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In this review we reported and discussed the structural features of the ATP-Binding Cassette (ABC) transporter ABCA3 and how the use of bioinformatics tools could help researchers to obtain a reliable structural model of this important transporter. In fact, a model of ABCA3 is still lacking and no crystallographic structures (of the transporter or of its orthologues) are available. With the advent of next generation sequencing, many disease-causing mutations have been discovered and many more will be found in the future. In the last few years, ABCA3 mutations have been reported to have important pediatric implications. Thus, clinicians need a reliable structure to locate relevant mutations of this transporter and make genotype/phenotype correlations of patients affected by ABCA3-related diseases. In conclusion, we strongly believe that the model preliminarily generated by these novel bioinformatics tools could be the starting point to obtain more refined models of the ABCA3 transporter.
引用
收藏
页码:19631 / 19644
页数:14
相关论文
共 61 条
[1]   The ABCA subfamily - gene and protein structures, functions and associated hereditary diseases [J].
Albrecht, Christiane ;
Viturro, Enrique .
PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY, 2007, 453 (05) :581-589
[2]   ABCA3 as a lipid transporter in pulmonary surfactant biogenesis [J].
Ban, Nobuhiro ;
Matsumura, Yoshihiro ;
Sakai, Hiromichi ;
Takanezawa, Yasukazu ;
Sasaki, Mayumi ;
Arai, Hiroyuki ;
Inagaki, Nobuya .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (13) :9628-9634
[3]   Conditional deletion of Abca3 in alveolar type II cells alters surfactant homeostasis in newborn and adult mice [J].
Besnard, Valerie ;
Matsuzaki, Yohei ;
Clark, Jean ;
Xu, Yan ;
Wert, Susan E. ;
Ikegami, Machiko ;
Stahlman, Mildred T. ;
Weaver, Timothy E. ;
Hunt, Alan N. ;
Postle, Anthony D. ;
Whitsett, Jeffrey A. .
AMERICAN JOURNAL OF PHYSIOLOGY-LUNG CELLULAR AND MOLECULAR PHYSIOLOGY, 2010, 298 (05) :L646-L659
[4]   Ultrastructural and molecular analysis in fatal neonatal interstitial pneumonia caused by a novel ABCA3 mutation [J].
Bruder, Elisabeth ;
Hofmeister, Joerg ;
Aslanidis, Charalampos ;
Hammer, Juerg ;
Bubendorf, Lukas ;
Schmitz, Gerd ;
Rufle, Alex ;
Buehrer, Christoph .
MODERN PATHOLOGY, 2007, 20 (10) :1009-1018
[5]   ABCA3 mutations associated with pediatric interstitial lung disease [J].
Bullard, JE ;
Wert, SE ;
Whitsett, JA ;
Dean, M ;
Nogee, LM .
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 2005, 172 (08) :1026-1031
[6]   RETRACTED: Structure of MsbA from E-coli:: A homolog of the multidrug resistance ATP binding cassette (ABC) transporters (Retracted Article. See vol 314, pg 1875, 2006) [J].
Chang, G ;
Roth, CB .
SCIENCE, 2001, 293 (5536) :1793-1800
[7]   Functional and trafficking defects in ATP binding cassette A3 mutants associated with respiratory distress syndrome [J].
Cheong, N ;
Madesh, M ;
Gonzales, LW ;
Zhao, M ;
Yu, K ;
Ballard, PL ;
Shuman, H .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, 281 (14) :9791-9800
[8]   ABCA3 is critical for lamellar body biogenesis in vivo [J].
Cheong, Naeun ;
Zhang, Huayan ;
Madesh, Muniswamy ;
Zhao, Ming ;
Yu, Kevin ;
Dodia, Chandra ;
Fisher, Aron B. ;
Savani, Rashmin C. ;
Shuman, Henry .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (33) :23811-23817
[9]   Structure, function, and evolution of bacterial ATP-binding cassette systems [J].
Davidson, Amy L. ;
Dassa, Elie ;
Orelle, Cedric ;
Chen, Jue .
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2008, 72 (02) :317-364
[10]   Structure of a bacterial multidrug ABC transporter [J].
Dawson, Roger J. P. ;
Locher, Kaspar P. .
NATURE, 2006, 443 (7108) :180-185