Crossover from a Linear to a Branched Growth Regime in the Crystallization of Lysozyme

被引:8
作者
Heigl, R. J. [1 ]
Longo, M. [1 ]
Stellbrink, J. [2 ,3 ]
Radulescu, A. [1 ]
Schweins, R. [4 ]
Schrader, T. E. [1 ]
机构
[1] Forschungszentrum Julich, JCNS, Heinz Maier Leibnitz Zentrum MLZ, Lichtenbergstr 1, D-85748 Garching, Germany
[2] Forschungszentrum Julich, Julich Ctr Neutron Sci JCNS 1, D-52425 Julich, Germany
[3] Forschungszentrum Julich, Inst Complex Syst ICS 1, D-52425 Julich, Germany
[4] ILL Grenoble, DS LSS, 71 Ave Martyrs, F-38000 Grenoble, France
基金
欧盟地平线“2020”;
关键词
CLUSTER-SIZE DISTRIBUTION; SMALL-ANGLE SCATTERING; LIGHT-SCATTERING; FRACTAL DIMENSION; PROTEIN CRYSTALLIZATION; NEUTRON-SCATTERING; NUCLEATION RATES; AGGREGATION; DYNAMICS; CRYSTALLOGRAPHY;
D O I
10.1021/acs.cgd.7b01433
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Using lysozyme as a crystallization model, existing intermediate clusters and aggregates have been previously identified as fractal systems using light scattering techniques. However, this has not been confirmed with neutron or X-ray scattering directly. In this work, we attempt to deepen our knowledge of the role of the fractal clusters during the crystallization process by following the evolution of the fractal dimension d(f) from the early stage of the nucleation process. Indeed, three different scattering techniques have been used simultaneously on the same sample: dynamic light scattering, small-angle neutron scattering, and static light scattering. We focused on the optimal batch crystallization condition in order to obtain large crystals (30 mg/mL lysozyme concentration and 3 wt % sodium chloride at pD 4.75 at 298 K). The selected temperature reduces the nucleation speed allowing us to investigate in detail the very early stage of the crystallization process. A direct temporal change of the fractal dimension d(f) during the initial growth phase of lysozyme was observed with d(f) rising from 1.0 to 1.7 in the first 90 min after initiating the crystallization process. The early phase of crystallization shows remarkable similarities to simulations on colloid aggregation. Long-term dynamic light scattering measurements allowed us to gain some insight into how fractal clusters may contribute during the crystal growth process. These findings help to improve theoretical models of crystal growth and may lead to the growth of larger crystals through a better understanding of the initial nucleation phase.
引用
收藏
页码:1483 / 1494
页数:12
相关论文
共 71 条
[1]   Emulsion-Based Technique To Measure Protein Crystal Nucleation Rates of Lysozyme [J].
Akella, Sathish V. ;
Mowitz, Aaron ;
Heymann, Michael ;
Fraden, Seth .
CRYSTAL GROWTH & DESIGN, 2014, 14 (09) :4487-4509
[2]   RECENT DEVELOPMENTS IN AGGREGATION KINETICS [J].
ASNAGHI, D ;
CARPINETI, M ;
GIGLIO, M .
MRS BULLETIN, 1994, 19 (05) :14-18
[3]   Neutron structures of the Helicobacter pylori 5′-methylthioadenosine nucleosidase highlight proton sharing and protonation states [J].
Banco, Michael T. ;
Mishra, Vidhi ;
Ostermann, Andreas ;
Schrader, Tobias E. ;
Evans, Gary B. ;
Kovalevsky, Andrey ;
Ronning, Donald R. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2016, 113 (48) :13756-13761
[4]   Small-angle scattering from polymeric mass fractals of arbitrary mass-fractal dimension [J].
Beaucage, G .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1996, 29 (pt 2) :134-146
[5]   OPTICS OF FRACTAL CLUSTERS SUCH AS SMOKE [J].
BERRY, MV ;
PERCIVAL, IC .
OPTICA ACTA, 1986, 33 (05) :577-591
[6]   Neutron crystallography: opportunities, challenges, and limitations [J].
Blakeley, Matthew P. ;
Langan, Paul ;
Niimura, Nobuo ;
Podjarny, Alberto .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2008, 18 (05) :593-600
[7]   Sub-atomic resolution X-ray crystallography and neutron crystallography: promise, challenges and potential [J].
Blakeley, Matthew P. ;
Hasnain, Samar S. ;
Antonyuk, Svetlana V. .
IUCRJ, 2015, 2 :464-474
[8]   Second virial coefficient:: variations with lysozyme crystallization conditions [J].
Bonneté, F ;
Finet, S ;
Tardieu, A .
JOURNAL OF CRYSTAL GROWTH, 1999, 196 (2-4) :403-414
[9]   Early stages of protein crystallization as revealed by emerging optical waveguide technology [J].
Boudjemline, Attia ;
Clarke, David T. ;
Freeman, Neville J. ;
Nicholson, James M. ;
Jones, Gareth R. .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2008, 41 :523-530
[10]   High-Resolution Protein Structure Determination by Serial Femtosecond Crystallography [J].
Boutet, Sebastien ;
Lomb, Lukas ;
Williams, Garth J. ;
Barends, Thomas R. M. ;
Aquila, Andrew ;
Doak, R. Bruce ;
Weierstall, Uwe ;
DePonte, Daniel P. ;
Steinbrener, Jan ;
Shoeman, Robert L. ;
Messerschmidt, Marc ;
Barty, Anton ;
White, Thomas A. ;
Kassemeyer, Stephan ;
Kirian, Richard A. ;
Seibert, M. Marvin ;
Montanez, Paul A. ;
Kenney, Chris ;
Herbst, Ryan ;
Hart, Philip ;
Pines, Jack ;
Haller, Gunther ;
Gruner, Sol M. ;
Philipp, Hugh T. ;
Tate, Mark W. ;
Hromalik, Marianne ;
Koerner, Lucas J. ;
van Bakel, Niels ;
Morse, John ;
Ghonsalves, Wilfred ;
Arnlund, David ;
Bogan, Michael J. ;
Caleman, Carl ;
Fromme, Raimund ;
Hampton, Christina Y. ;
Hunter, Mark S. ;
Johansson, Linda C. ;
Katona, Gergely ;
Kupitz, Christopher ;
Liang, Mengning ;
Martin, Andrew V. ;
Nass, Karol ;
Redecke, Lars ;
Stellato, Francesco ;
Timneanu, Nicusor ;
Wang, Dingjie ;
Zatsepin, Nadia A. ;
Schafer, Donald ;
Defever, James ;
Neutze, Richard .
SCIENCE, 2012, 337 (6092) :362-364