Variation in the Insulin-Like Growth Factor 1 Gene in Primates

被引:11
作者
Rotwein, Peter [1 ]
机构
[1] Texas Tech Hlth Univ, Hlth Sci Ctr, Paul L Foster Sch Med, Dept Biomed Sci, 5001 El Paso Dr, El Paso, TX 79905 USA
基金
美国国家卫生研究院;
关键词
FACTOR-I GENE; BINDING-PROTEIN-DELTA; IGF-I; FUNCTIONAL-ANALYSIS; POSTNATAL-GROWTH; MESSENGER-RNAS; HORMONE; TRANSCRIPTION; EXPRESSION; PROMOTER;
D O I
10.1210/en.2016-1920
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Insulin-like growth factor 1 (IGF1) is a multifunctional peptide that is involved in a wide range of physiological and pathophysiological processes in many animal species, ranging from somatic growth in children to metabolism and tissue regeneration and repair in adults. The IGF1 gene is under multifactorial regulation in the few species in which it has been studied, with major control being exerted by growth hormone through a gene expression pathway involving inducible binding of the STAT5b transcription factor to dispersed enhancer elements. In this study, using resources available in public genomic databases, genes encoding IGF1 have been analyzed in a cohort of six nonhuman primate species representing > 60 million years of evolutionary diversification from a common ancestor: chimpanzee, gorilla, macaque, olive baboon, marmoset, and mouse lemur. The IGF1 gene has been well conserved among these primates. Similar to human IGF1, each gene appears to be composed of six exons and five introns, and contains recognizable tandem promoters, each with a unique leader exon. Exon and intron lengths are very similar, and DNA sequence conservation is high, not only in orthologous exons and promoter regions, but also in putative growth hormone-activated STAT5b-binding enhancers that are found in analogous locations in IGF1 intron 3 and in 5 ' distal intergenic DNA. Taken together, the high level of organizational and nucleotide sequence similarity in the IGF1 gene and locus among these seven species supports the contention that common regulatory paradigms had existed prior to the onset of primate speciation > 85 million years ago.
引用
收藏
页码:804 / 814
页数:11
相关论文
共 65 条
[1]   REGULATION OF START SITE USAGE IN THE LEADER EXONS OF THE RAT INSULIN-LIKE GROWTH FACTOR-I GENE BY DEVELOPMENT, FASTING, AND DIABETES [J].
ADAMO, ML ;
BENHUR, H ;
ROBERTS, CT ;
LEROITH, D .
MOLECULAR ENDOCRINOLOGY, 1991, 5 (11) :1677-1686
[2]  
Adamo ML., 1995, DIABETES REV, V3, P2
[3]   The role of regulatory variation in complex traits and disease [J].
Albert, Frank W. ;
Kruglyak, Leonid .
NATURE REVIEWS GENETICS, 2015, 16 (04) :197-212
[4]   Identifying growth hormone-regulated enhancers in the Igf1 locus [J].
Alzhanov, Damir ;
Mukherjee, Aditi ;
Rotwein, Peter .
PHYSIOLOGICAL GENOMICS, 2015, 47 (11) :559-568
[5]   Using large sequencing data sets to refine intragenic disease regions and prioritize clinical variant interpretation [J].
Amr, Sami S. ;
Al Turki, Saeed H. ;
Lebo, Matthew ;
Sarmady, Mahdi ;
Rehm, Heidi L. ;
Abou Tayoun, Ahmad N. .
GENETICS IN MEDICINE, 2017, 19 (05) :496-504
[6]   THE MAJOR PROMOTER OF THE RAT INSULIN-LIKE GROWTH-FACTOR-I GENE BINDS A PROTEIN COMPLEX THAT IS REQUIRED FOR BASAL EXPRESSION [J].
AN, MR ;
LOWE, WL .
MOLECULAR AND CELLULAR ENDOCRINOLOGY, 1995, 114 (1-2) :77-89
[7]   ExAC boosts clinical variant interpretation in rare diseases [J].
Bahcall, Orli G. .
NATURE REVIEWS GENETICS, 2016, 17 (10) :584-584
[8]   Short and tall stature: a new paradigm emerges [J].
Baron, Jeffrey ;
Saevendahl, Lars ;
De Luca, Francesco ;
Dauber, Andrew ;
Phillip, Moshe ;
Wit, Jan M. ;
Nilsson, Ola .
NATURE REVIEWS ENDOCRINOLOGY, 2015, 11 (12) :735-746
[9]   Role of the GH/IGF-1 axis in lifespan and healthspan: Lessons from animal models [J].
Berryman, Darlene E. ;
Christiansen, Jens Sandahl ;
Johannsson, Gudmundur ;
Thorner, Michael O. ;
Kopchick, John J. .
GROWTH HORMONE & IGF RESEARCH, 2008, 18 (06) :455-471
[10]   Hormonal control of insulin-like growth factor I gene transcription in human osteoblasts -: Dual actions of cAMP-dependent protein kinase on CCAAT/enhancer-binding protein δ [J].
Billiard, J ;
Grewal, SS ;
Lukaesko, L ;
Stork, PJS ;
Rotwein, P .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (33) :31238-31246