The complete mitochondrial DNA sequence of the cape hare Lepus capensis pamirensis

被引:10
作者
Shan, Wen-Juan [1 ]
Liu, Yun-Guo [1 ]
机构
[1] Xinjiang Univ, Coll Life Sci & Technol, Xinjiang Key Lab Biol Resources & Genet Engn, Urumqi, Peoples R China
关键词
Lepus capensis pamirensis; cape hare; mitochondrial genome; TRANSFER-RNA GENES; GENOME; PROGRAM;
D O I
10.3109/19401736.2015.1101569
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Lepus capensis pamirensis is a specific cape hare species that is only distributed in the Pamirs, with a cruel natural environment. The complete mitochondrial genome of the cape hare L. c. pamirensis was first determined (accession number LC073697), in a total length of 17 597 nucleotides, of which 15 310 nucleotides are coding DNA and 2287 nucleotides are non-coding DNA. It has the common feature with those of other hares with respect to genome structure and gene arrangement. It contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer tRNA genes and 1 control region (D-loop region). The complete mitochondrial genome of the cape hare L. c. pamirensis provides an important data set for further study on its classification.
引用
收藏
页码:4572 / 4573
页数:2
相关论文
共 10 条
  • [1] Complete sequence of the yak (Bos grunniens) mitochondrial genome and its evolutionary relationship with other ruminants
    Gu, Zhiliang
    Zhao, Xingbo
    Li, Ning
    Wu, Changxing
    [J]. MOLECULAR PHYLOGENETICS AND EVOLUTION, 2007, 42 (01) : 248 - 255
  • [2] The complete mitochondrial DNA sequence of the Mekong giant catfish (Pangasianodon gigas), and the phylogenetic relationships among Siluriformes
    Jondeung, Amnuay
    Sangthong, Pradit
    Zardoya, Rafael
    [J]. GENE, 2007, 387 (1-2) : 49 - 57
  • [3] A comparative analysis of the complete mitochondrial genome of the Eurasian otter Lutra lutra (Carnivora; Mustelidae)
    Ki, Jang-Seu
    Hwang, Dae-Sik
    Park, Tae-Jin
    Han, Sang-Hoon
    Lee, Jae-Seong
    [J]. MOLECULAR BIOLOGY REPORTS, 2010, 37 (04) : 1943 - 1955
  • [4] ARWEN:: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences
    Laslett, Dean
    Canback, Bjorn
    [J]. BIOINFORMATICS, 2008, 24 (02) : 172 - 175
  • [5] The complete mitochondrial genome of Macaca thibetana and a novel nuclear mitochondrial pseudogene
    Li, Deming
    Fan, Longqing
    Zeng, Bo
    Yin, Hailin
    Zou, Fangdong
    Wang, Hongxing
    Meng, Yang
    King, Emily
    Yue, Bisong
    [J]. GENE, 2009, 429 (1-2) : 31 - 36
  • [6] Complete mitochondrial DNA sequence of the ark shell Scapharca broughtonii: An ultra-large metazoan mitochondrial genome
    Liu, Yun-Guo
    Kurokawa, Tadahide
    Sekino, Masashi
    Tanabe, Toru
    Watanabe, Kazuhito
    [J]. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS, 2013, 8 (01): : 72 - 81
  • [7] tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    Lowe, TM
    Eddy, SR
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (05) : 955 - 964
  • [8] PATTERNS OF NUCLEOTIDE COMPOSITION AT FOURFOLD DEGENERATE SITES OF ANIMAL MITOCHONDRIAL GENOMES
    PERNA, NT
    KOCHER, TD
    [J]. JOURNAL OF MOLECULAR EVOLUTION, 1995, 41 (03) : 353 - 358
  • [9] Shan Wen-Juan, 2011, Zoological Research, V32, P179, DOI 10.3724/SP.J.1141.2011.02179
  • [10] The complete mitochondrial genome of the Daweizi pig
    Xu, Dong
    He, Chang-Qing
    Li, Qing-Hui
    He, Jun
    Ma, Hai-Ming
    [J]. MITOCHONDRIAL DNA, 2015, 26 (04): : 640 - 641