Adaptive innovation of green plants by horizontal gene transfer

被引:28
作者
Chen, Rujia [1 ,2 ]
Huangfu, Liexiang [1 ,2 ]
Lu, Yue [1 ,2 ]
Fang, Huimin [2 ]
Xu, Yang [1 ,2 ]
Li, Pengcheng [1 ,2 ]
Zhou, Yong [1 ,2 ]
Xu, Chenwu [1 ,2 ]
Huang, Jinling [3 ,4 ,5 ]
Yang, Zefeng [1 ,2 ]
机构
[1] Yangzhou Univ, Jiangsu Key Lab Crop Genet & Physiol, Key Lab Plant Funct Genom,Agr Coll, Minist Educ,Jiangsu Key Lab Crop Genom & Mol Bree, Yangzhou 225009, Jiangsu, Peoples R China
[2] Yangzhou Univ, Jiangsu Coinnovat Ctr Modern Prod Technol Grain C, Yangzhou 225009, Jiangsu, Peoples R China
[3] East Carolina Univ, Dept Biol, Greenville, NC 28590 USA
[4] Henan Univ, Sch Life Sci, State Key Lab Crop Stress Adaptat & Improvement, Key Lab Plant Stress Biol, Kaifeng 475004, Peoples R China
[5] Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Divers & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China
基金
中国国家自然科学基金;
关键词
Plant evolution; adaptation; exaptation; plant-to-plant HGT; crop breeding and improvement; ICE-BINDING PROTEINS; LAND PLANTS; TRANSPOSABLE ELEMENTS; EVOLUTION; GENOME; ORIGIN; DNA; BIOSYNTHESIS; ALGA; RETROTRANSPOSONS;
D O I
10.1016/j.biotechadv.2020.107671
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Horizontal gene transfer (HGT) refers to the movement of genetic material between distinct species by means other than sexual reproduction. HGT has contributed tremendously to the genome plasticity and adaptive evolution of prokaryotes and certain unicellular eukaryotes. The evolution of green plants from chlorophyte algae to angiosperms and from water to land represents a process of adaptation to diverse environments, which has been facilitated by acquisition of genetic material from other organisms. In this article, we review the occurrence of HGT in major lineages of green plants, including chlorophyte and charophyte green algae, bryophytes, lycophytes, ferns, and seed plants. In addition, we discuss the significance of horizontally acquired genes in the adaptive innovations of green plants and their potential applications to crop breeding and improvement.
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页数:13
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共 117 条
[1]   Ice-Binding Proteins and Their Function [J].
Bar Dolev, Maya ;
Braslavsky, Ido ;
Davies, Peter L. .
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 85, 2016, 85 :515-542
[2]   Mitochondrial DNA suggests at least 11 origins of parasitism in angiosperms and reveals genomic chimerism in parasitic plants [J].
Barkman, Todd J. ;
McNeal, Joel R. ;
Lim, Seok-Hong ;
Coat, Gwen ;
Croom, Henrietta B. ;
Young, Nelson D. ;
dePamphilis, Claude W. .
BMC EVOLUTIONARY BIOLOGY, 2007, 7 (1)
[3]   Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella [J].
Bergthorsson, U ;
Richardson, AO ;
Young, GJ ;
Goertzen, LR ;
Palmer, JD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (51) :17747-17752
[4]   The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation [J].
Blanc, Guillaume ;
Agarkova, Irina ;
Grimwood, Jane ;
Kuo, Alan ;
Brueggeman, Andrew ;
Dunigan, David D. ;
Gurnon, James ;
Ladunga, Istvan ;
Lindquist, Erika ;
Lucas, Susan ;
Pangilinan, Jasmyn ;
Proeschold, Thomas ;
Salamov, Asaf ;
Schmutz, Jeremy ;
Weeks, Donald ;
Yamada, Takashi ;
Lomsadze, Alexandre ;
Borodovsky, Mark ;
Claverie, Jean-Michel ;
Grigoriev, Igor V. ;
Van Etten, James L. .
GENOME BIOLOGY, 2012, 13 (05)
[5]   The give-and-take of DNA: horizontal gene transfer in plants [J].
Bock, Ralph .
TRENDS IN PLANT SCIENCE, 2010, 15 (01) :11-22
[6]   The Origin of Land Plants Is Rooted in Two Bursts of Genomic Novelty [J].
Bowles, Alexander M. C. ;
Bechtold, Ulrike ;
Paps, Jordi .
CURRENT BIOLOGY, 2020, 30 (03) :530-+
[7]   Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome [J].
Bowman, John L. ;
Kohchi, Takayuki ;
Yamato, Katsuyuki T. ;
Jenkins, Jerry ;
Shu, Shengqiang ;
Ishizaki, Kimitsune ;
Yamaoka, Shohei ;
Nishihama, Ryuichi ;
Nakamura, Yasukazu ;
Berger, Frederic ;
Adam, Catherine ;
Aki, Shiori Sugamata ;
Althoff, Felix ;
Araki, Takashi ;
Arteaga-Vazquez, Mario A. ;
Balasubrmanian, Sureshkumar ;
Barry, Kerrie ;
Bauer, Diane ;
Boehm, Christian R. ;
Briginshaw, Liam ;
Caballero-Perez, Juan ;
Catarino, Bruno ;
Chen, Feng ;
Chiyoda, Shota ;
Chovatia, Mansi ;
Davies, Kevin M. ;
Delmans, Mihails ;
Demura, Taku ;
Dierschke, Tom ;
Dolan, Liam ;
Dorantes-Acosta, Ana E. ;
Eklund, D. Magnus ;
Florent, Stevie N. ;
Flores-Sandoval, Eduardo ;
Fujiyama, Asao ;
Fukuzawa, Hideya ;
Galik, Bence ;
Grimanelli, Daniel ;
Grimwood, Jane ;
Grossniklaus, Ueli ;
Hamada, Takahiro ;
Haseloff, Jim ;
Hetherington, Alexander J. ;
Higo, Asuka ;
Hirakawa, Yuki ;
Hundley, Hope N. ;
Ikeda, Yoko ;
Inoue, Keisuke ;
Inoue, Shin-Ichiro ;
Ishida, Sakiko .
CELL, 2017, 171 (02) :287-+
[8]   Root-specific expression of opine genes and opine accumulation in some cultivars of the naturally occurring genetically modified organism Nicotiana tabacum [J].
Chen, Ke ;
de Borne, Francois Dorlhac ;
Julio, Emilie ;
Obszynski, Julie ;
Pale, Patrick ;
Otten, Leon .
PLANT JOURNAL, 2016, 87 (03) :258-269
[9]   CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture [J].
Chen, Kunling ;
Wang, Yanpeng ;
Zhang, Rui ;
Zhang, Huawei ;
Gao, Caixia .
ANNUAL REVIEW OF PLANT BIOLOGY, VOL 70, 2019, 70 :667-697
[10]   Origin, evolution and functional characterization of the land plant glycoside hydrolase subfamily GH5_11 [J].
Chen, Rujia ;
Yao, Youli ;
Fang, Huimin ;
Zhang, Enying ;
Li, Pengcheng ;
Xu, Yang ;
Yin, Shuangyi ;
Huangfu, Liexiang ;
Sun, Guiling ;
Xu, Chenwu ;
Zhou, Yong ;
Yang, Zefeng .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 138 :205-218