On the Mechanism of the Mutagenic Action of 5-Bromouracil: A DFT Study of Uracil and 5-Bromouracil in a Water Cluster

被引:45
作者
Danilov, Victor I. [2 ]
van Mourik, Tanja [1 ]
Kurita, Noriyuki [3 ]
Wakabayashi, Hajime [3 ]
Tsukamoto, Takayuki [3 ]
Hovorun, Drnytro M. [2 ]
机构
[1] Natl Acad Sci Ukraine, Dept Mol & Quantum Biophys, Inst Mol Biol & Genet, UA-03143 Kiev 143, Ukraine
[2] Univ St Andrews, Sch Chem, St Andrews KY16 9ST, Fife, Scotland
[3] Toyohashi Univ Technol, Dept Knowledge Based Informat Engn, Toyohashi, Aichi 4418580, Japan
关键词
NUCLEIC-ACID BASES; DENSITY FUNCTIONALS; MONTE-CARLO; SIMULATION; HYDRATION; ENERGIES;
D O I
10.1021/jp811007j
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Density functional theory calculations on the canonical (keto) and rare (enol) tautomeric forms of uracil and 5-bromouracil in a cluster consisting of 50 water molecules are presented. The keto form of uracil is favored over the enol tautomer in both the gas phase and solution. However, the presence of the water cluster reverses the tautomeric preference of 5-bromouracil, rendering the rare tautomeric form to be preferred over the canonical form in aqueous solution. This effect is, to a large extent, due to the more favorable water-water interactions in the cluster around 5-bromouracil and can therefore only be obtained by including explicit water-water interactions in the calculations.
引用
收藏
页码:2233 / 2235
页数:3
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