Non-covalent binding of membrane lipids to membrane proteins

被引:118
作者
Yeagle, Philip L. [1 ]
机构
[1] Rutgers State Univ, Newark, NJ 07102 USA
来源
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES | 2014年 / 1838卷 / 06期
关键词
Lipid-protein interaction; Lipid binding site; X-ray diffraction; NMR; NUCLEAR-MAGNETIC-RESONANCE; SEGMENT DISK MEMBRANES; CYTOCHROME-C-OXIDASE; SARCOPLASMIC-RETICULUM MEMBRANE; MOLECULAR-DYNAMICS SIMULATIONS; PHOTOSYNTHETIC REACTION-CENTER; MITOCHONDRIAL ADP/ATP CARRIER; POLYMORPHIC PHASE BEHAVIOR; GATED SODIUM-CHANNEL; CRYSTAL-STRUCTURE;
D O I
10.1016/j.bbamem.2013.11.009
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Polar lipids and membrane proteins are major components of biological membranes, both cell membranes and membranes of enveloped viruses. How these two classes of membrane components interact with each other to influence the function of biological membranes is a fundamental question that has attracted intense interest since the origins of the field of membrane studies. One of the most powerful ideas that driven the field is the likelihood that lipids bind to membrane proteins at specific sites, modulating protein structure and function. However only relatively recently has high resolution structure determination of membrane proteins progressed to the point of providing atomic level structure of lipid binding sites on membrane proteins. Analysis of X-ray diffraction, electron crystallography and NMR data over 100 specific lipid binding sites on membrane proteins. These data demonstrate tight lipid binding of both phospholipids and cholesterol to membrane proteins. Membrane lipids bind to membrane proteins by their headgroups, or by their acyl chains, or binding is mediated by the entire lipid molecule. When headgroups bind, binding is stabilized by polar interactions between lipid headgroups and the protein. When acyl chains bind, van der Waals effects dominate as the acyl chains adopt conformations that complement particular sites on the rough protein surface. No generally applicable motifs for binding have yet emerged. Previously published biochemical and biophysical data link this binding with function. This Article is Part of a Special Issue Entitled: Membrane Structure and Function: Relevance in the Cell's Physiology, Pathology and Therapy. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:1548 / 1559
页数:12
相关论文
共 50 条
  • [31] Solid-state NMR spectroscopy for the analysis of element-based non-covalent interactions
    Xu, Yijue
    Szell, Patrick M. J.
    Kumar, Vijith
    Bryce, David L.
    COORDINATION CHEMISTRY REVIEWS, 2020, 411
  • [32] PPARγ non-covalent antagonists exhibit mutable binding modes with a similar free energy of binding: a case study
    Fratev, Filip
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2017, 35 (03) : 476 - 485
  • [33] Non-Covalent Reactions Supporting Antiviral Development
    Nugrahani, Ilma
    Susanti, Emy
    Adawiyah, Tazkia
    Santosa, Safira
    Laksana, Agnesya Namira
    MOLECULES, 2022, 27 (24):
  • [34] Anionic Lipids Impact RAS-Binding Site Accessibility and Membrane Binding Affinity of CRAF RBD-CRD
    Travers, Timothy
    Lopez, Cesar A.
    Agamasu, Constance
    Hettige, Jeevapani J.
    Messing, Simon
    Garcia, Angel E.
    Stephen, Andrew G.
    Gnanakaran, S.
    BIOPHYSICAL JOURNAL, 2020, 119 (03) : 525 - 538
  • [35] Computational modeling of membrane proteins
    Leman, Julia Koehler
    Ulmschneider, Martin B.
    Gray, Jeffrey J.
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2015, 83 (01) : 1 - 24
  • [36] Helix packing in membrane proteins
    Bowie, JU
    JOURNAL OF MOLECULAR BIOLOGY, 1997, 272 (05) : 780 - 789
  • [37] Structural genomics of membrane proteins
    Kyogoku, Y
    Fujiyoshi, Y
    Shimada, I
    Nakamura, H
    Tsukihara, T
    Akutsu, H
    Odahara, T
    Okada, T
    Nomura, N
    ACCOUNTS OF CHEMICAL RESEARCH, 2003, 36 (03) : 199 - 206
  • [38] Applications of NMR to membrane proteins
    Opella, Stanley J.
    Marassi, Francesca M.
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2017, 628 : 92 - 101
  • [39] Extraction and liposome reconstitution of membrane proteins with their native lipids without the use of detergents
    Smirnova, Irina A.
    Adelroth, Pia
    Brzezinski, Peter
    SCIENTIFIC REPORTS, 2018, 8
  • [40] Lipidated proteins: Spotlight on protein-membrane binding interfaces
    Ray, Arjun
    Jatana, Nidhi
    Thukral, Lipi
    PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 2017, 128 : 74 - 84