Metric representation of DNA sequences

被引：0

作者：

Wu, ZB ^{[1
]}

机构：

[1] Acad Sinica, Inst Mech, Lab Nonlinear Mech, Beijing 100080, Peoples R China

[2] Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China

来源：

ELECTROPHORESIS | 2000年 / 21卷 / 12期

关键词：

DNA sequences; metric representation; suppression of short nucleotide strings;

D O I：

10.1002/1522-2683(20000701)21:12<2321::AID-ELPS2321>3.0.CO;2-S

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

A metric representation of DNA sequences is borrowed from symbolic dynamics. In view of this method, the pattern seen in the chaos game representation of DNA sequences is explained as the suppression of certain nucleotide strings in the DNA sequences. Frequencies of short nucleotide strings and suppression of the shortest ones in the DNA sequences can be determined by using the metric representation.

引用

页码：2321 / 2326

页数：6

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