Meta-analysis in Stata using gllamm

被引:20
作者
Bagos, Pantelis G. [1 ]
机构
[1] Univ Thessaly, Dept Comp Sci & Biomed Informat, Papasiopoulou 2-4, Lamia 35100, Greece
关键词
meta-analysis; tutorial; Stata; gllamm; INVESTIGATING UNDERLYING RISK; GENE-DISEASE ASSOCIATIONS; GENOME-WIDE ASSOCIATION; RANDOM-EFFECTS MODELS; LINEAR MIXED-MODEL; DOSE-RESPONSE DATA; CLINICAL-TRIALS; META-REGRESSION; SYSTEMATIC REVIEWS; TREND ESTIMATION;
D O I
10.1002/jrsm.1157
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
There are several user-written programs for performing meta-analysis in Stata (Stata Statistical Software: College Station, TX: Stata Corp LP). These include metan, metareg, mvmeta, and glst. However, there are several cases for which these programs do not suffice. For instance, there is no software for performing univariate meta-analysis with correlated estimates, for multilevel or hierarchical meta-analysis, or for meta-analysis of longitudinal data. In this work, we show with practical applications that many disparate models, including but not limited to the ones mentioned earlier, can be fitted using gllamm. The software is very versatile and can handle a wide variety of models with applications in a wide range of disciplines. The method presented here takes advantage of these modeling capabilities and makes use of appropriate transformations, based on the Cholesky decomposition of the inverse of the covariance matrix, known as generalized least squares, in order to handle correlated data. The models described earlier can be thought of as special instances of a general linear mixed-model formulation, but to the author's knowledge, a general exposition in order to incorporate all the available models for meta-analysis as special cases and the instructions to fit them in Stata has not been presented so far. Source code is available at http:. Copyright (c) 2015 John Wiley & Sons, Ltd.
引用
收藏
页码:310 / 332
页数:23
相关论文
共 103 条
[11]   Combining multiple outcome measures in a meta-analysis:: an application [J].
Arends, LR ;
Vokó, Z ;
Stijnen, T .
STATISTICS IN MEDICINE, 2003, 22 (08) :1335-1353
[13]   A method for meta-analysis of case-control genetic association studies using logistic regression [J].
Bagos, Pantelis G. ;
Nikolopoulos, Georgios K. .
STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY, 2007, 6
[14]   On the covariance of two correlated log-odds ratios [J].
Bagos, Pantelis G. .
STATISTICS IN MEDICINE, 2012, 31 (14) :1418-1431
[15]   Meta-Analysis of Family-Based and Case-Control Genetic Association Studies that Use the Same Cases [J].
Bagos, Pantelis G. ;
Dimou, Niki L. ;
Liakopoulos, Theodore D. ;
Nikolopoulos, Georgios K. .
STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY, 2011, 10 (01)
[16]   A Multipoint Method for Meta-Analysis of Genetic Association Studies [J].
Bagos, Pantelis G. ;
Liakopoulos, Theodore D. .
GENETIC EPIDEMIOLOGY, 2010, 34 (07) :702-715
[17]   Mixed-Effects Poisson Regression Models for Meta-Analysis of Follow-Up Studies with Constant or Varying Durations [J].
Bagos, Pantelis G. ;
Nikolopoulos, Georgios K. .
INTERNATIONAL JOURNAL OF BIOSTATISTICS, 2009, 5 (01)
[18]   Obesity and renal cell cancer -: a quantitative review [J].
Bergström, A ;
Hsieh, CC ;
Lindblad, P ;
Lu, CM ;
Cook, NR ;
Wolk, A .
BRITISH JOURNAL OF CANCER, 2001, 85 (07) :984-990
[19]  
Berkey CS, 1998, STAT MED, V17, P2537, DOI 10.1002/(SICI)1097-0258(19981130)17:22<2537::AID-SIM953>3.0.CO
[20]  
2-C