Automated data collection in single particle electron microscopy
被引:41
|
作者:
Tan, Yong Zi
论文数: 0引用数: 0
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机构:
New York Struct Biol Ctr, Natl Resource Automated Mol Microscopy, New York, NY 10027 USA
New York Struct Biol Ctr, Simons Electron Microscopy Ctr, New York, NY 10027 USA
Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USANew York Struct Biol Ctr, Natl Resource Automated Mol Microscopy, New York, NY 10027 USA
Tan, Yong Zi
[1
,2
,3
]
Cheng, Anchi
论文数: 0引用数: 0
h-index: 0
机构:
New York Struct Biol Ctr, Natl Resource Automated Mol Microscopy, New York, NY 10027 USA
New York Struct Biol Ctr, Simons Electron Microscopy Ctr, New York, NY 10027 USANew York Struct Biol Ctr, Natl Resource Automated Mol Microscopy, New York, NY 10027 USA
Cheng, Anchi
[1
,2
]
Potter, Clinton S.
论文数: 0引用数: 0
h-index: 0
机构:
New York Struct Biol Ctr, Natl Resource Automated Mol Microscopy, New York, NY 10027 USA
New York Struct Biol Ctr, Simons Electron Microscopy Ctr, New York, NY 10027 USA
Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USANew York Struct Biol Ctr, Natl Resource Automated Mol Microscopy, New York, NY 10027 USA
Potter, Clinton S.
[1
,2
,3
]
Carragher, Bridget
论文数: 0引用数: 0
h-index: 0
机构:
New York Struct Biol Ctr, Natl Resource Automated Mol Microscopy, New York, NY 10027 USA
New York Struct Biol Ctr, Simons Electron Microscopy Ctr, New York, NY 10027 USA
Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USANew York Struct Biol Ctr, Natl Resource Automated Mol Microscopy, New York, NY 10027 USA
Carragher, Bridget
[1
,2
,3
]
机构:
[1] New York Struct Biol Ctr, Natl Resource Automated Mol Microscopy, New York, NY 10027 USA
[2] New York Struct Biol Ctr, Simons Electron Microscopy Ctr, New York, NY 10027 USA
[3] Columbia Univ, Dept Biochem & Mol Biophys, New York, NY 10032 USA
single particle electron microscopy;
data collection;
automation;
target acquisition;
software packages;
high throughput;
COMA-FREE ALIGNMENT;
CRYO-EM;
CRYOELECTRON MICROSCOPY;
DATA-ACQUISITION;
CCD CAMERAS;
ANGSTROM RESOLUTION;
3-FOLD ASTIGMATISM;
STRUCTURAL BIOLOGY;
2D CRYSTALLIZATION;
SOFTWARE PLATFORM;
D O I:
10.1093/jmicro/dfv369
中图分类号:
TH742 [显微镜];
学科分类号:
摘要:
Automated data collection is an integral part of modern workflows in single particle electron microscopy (EM) research. This review surveys the software packages available for automated single particle EM data collection. The degree of automation at each stage of data collection is evaluated, and the capabilities of the software packages are described. Finally, future trends in automation are discussed.
机构:
Univ Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
Lawrence Berkeley Natl Lab, Phys Biosci Div, Berkeley, CA 94720 USA
Univ Calif Berkeley, Inst QB3, Berkeley, CA 94720 USAUniv Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
Shatsky, Maxim
Hall, Richard J.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Berkeley, Inst QB3, Berkeley, CA 94720 USAUniv Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
Hall, Richard J.
Nogales, Eva
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Berkeley, Inst QB3, Berkeley, CA 94720 USA
Lawrence Berkeley Natl Lab, Div Life Sci, Berkeley, CA 94720 USA
Univ Calif Berkeley, Howard Hughes Med Inst, Dept Mol & Cell Biol, Berkeley, CA 94720 USAUniv Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
Nogales, Eva
Malik, Jitendra
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Berkeley, Elect Engn & Comp Sci Div, Berkeley, CA 94720 USAUniv Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
Malik, Jitendra
Brenner, Steven E.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
Lawrence Berkeley Natl Lab, Phys Biosci Div, Berkeley, CA 94720 USA
Univ Calif Berkeley, Inst QB3, Berkeley, CA 94720 USAUniv Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
机构:
Univ Calif San Francisco, Howard Hughes Med Inst, San Francisco, CA 94143 USAUniv Calif San Francisco, Howard Hughes Med Inst, San Francisco, CA 94143 USA
Zheng, Shawn Q.
Sedat, J. W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Dept Biophys, WM Keck Adv Microscopy Lab, San Francisco, CA 94143 USAUniv Calif San Francisco, Howard Hughes Med Inst, San Francisco, CA 94143 USA
Sedat, J. W.
Agard, D. A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Howard Hughes Med Inst, San Francisco, CA 94143 USAUniv Calif San Francisco, Howard Hughes Med Inst, San Francisco, CA 94143 USA
Agard, D. A.
METHODS IN ENZYMOLOGY, VOL 481: CRYO-EM, PART A - SAMPLE PREPARATION AND DATA COLLECTION,
2010,
481
: 283
-
315
机构:
Scripps Inst, Dept Integrat Struct & Computat Biol, Natl Resource Automated Mol Microscopy, La Jolla, CA 92037 USAScripps Inst, Dept Integrat Struct & Computat Biol, Natl Resource Automated Mol Microscopy, La Jolla, CA 92037 USA
Lyumkis, Dmitry
Vinterbo, Staal
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Div Biomed Informat, La Jolla, CA 92093 USAScripps Inst, Dept Integrat Struct & Computat Biol, Natl Resource Automated Mol Microscopy, La Jolla, CA 92037 USA
Vinterbo, Staal
Potter, Clinton S.
论文数: 0引用数: 0
h-index: 0
机构:
Scripps Inst, Dept Integrat Struct & Computat Biol, Natl Resource Automated Mol Microscopy, La Jolla, CA 92037 USAScripps Inst, Dept Integrat Struct & Computat Biol, Natl Resource Automated Mol Microscopy, La Jolla, CA 92037 USA
Potter, Clinton S.
Carragher, Bridget
论文数: 0引用数: 0
h-index: 0
机构:
Scripps Inst, Dept Integrat Struct & Computat Biol, Natl Resource Automated Mol Microscopy, La Jolla, CA 92037 USAScripps Inst, Dept Integrat Struct & Computat Biol, Natl Resource Automated Mol Microscopy, La Jolla, CA 92037 USA