Classification of genes differentially expressed during water-deficit stress in Arabidopsis thaliana:: an analysis using Microarray and differential expression data

被引:152
|
作者
Bray, EA [1 ]
机构
[1] Univ Calif Riverside, Dept Bot & Plant Sci, Riverside, CA 92521 USA
[2] Univ Calif Riverside, Ctr Plant Cell Biol, Riverside, CA 92521 USA
关键词
water-deficit stress; gene expression; Arabidopsis thaliana;
D O I
10.1093/aob/mcf104
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Many changes in gene expression occur in response to water-deficit stress. A challenge is to determine which changes support plant adaptation to conditions of reduced soil water content and which occur in response to lesions in metabolic and cellular functions. Microarray methods are being employed to catalogue all of the changes in gene expression that occur in response to specific water-deficit conditions. Although these methods do not measure the amount or activities of specific proteins that function in the water-deficit response, they do target specific biochemical and cellular events that should be detailed in further work. Potential functions of approx. 130 genes of Arabidopsis thaliana that have been shown to be up-regulated are tabulated here. These point to signalling events, detoxification and other functions involved in the cellular response to water-deficit stress. As nucroarray techniques are refined, plant stress biologists will be able to characterize changes in gene expression within the whole genome in specific organs and tissues subjected to different levels of water-deficit stress. (C) 2002 Annals of Botany Company.
引用
收藏
页码:803 / 811
页数:9
相关论文
共 50 条
  • [1] Genes commonly regulated by water-deficit stress in Arabidopsis thaliana
    Bray, EA
    JOURNAL OF EXPERIMENTAL BOTANY, 2004, 55 (407) : 2331 - 2341
  • [2] Mixture distribution approach for identifying differentially expressed genes in microarray data of Arabidopsis thaliana
    Anjum, Arfa
    Jaggi, Seema
    Varghese, Eldho
    Lall, Shwetank
    Rai, Anil
    Bhowmik, Arpan
    Mishra, Dwijesh Chandra
    Sarika
    INDIAN JOURNAL OF AGRICULTURAL SCIENCES, 2020, 90 (10): : 139 - 143
  • [3] Sugarcane genes differentially expressed during water deficit
    Rodrigues, F. A.
    Da Graca, J. P.
    De Laia, M. L.
    Nhani-, A., Jr.
    Galbiati, J. A.
    Ferro, M. I. T.
    Ferro, J. A.
    Zingaretti, S. M.
    BIOLOGIA PLANTARUM, 2011, 55 (01) : 43 - 53
  • [4] Selection of differentially expressed genes in microarray data analysis
    J J Chen
    S-J Wang
    C-A Tsai
    C-J Lin
    The Pharmacogenomics Journal, 2007, 7 : 212 - 220
  • [5] Selection of differentially expressed genes in microarray data analysis
    Chen, J. J.
    Wang, S-J
    Tsai, C-A
    Lin, C-J
    PHARMACOGENOMICS JOURNAL, 2007, 7 (03): : 212 - 220
  • [6] Overexpression of Chickpea Defensin Gene Confers Tolerance to Water-Deficit Stress in Arabidopsis thaliana
    Kumar, Manoj
    Yusuf, Mohd Aslam
    Yadav, Pooja
    Narayan, Shiv
    Kumar, Manoj
    FRONTIERS IN PLANT SCIENCE, 2019, 10
  • [7] Bioinformatics analysis of differentially expressed genes in hyperplastic scars using microarray data
    Ding, Jiayue
    Xiang, Chun
    NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS, 2025,
  • [8] Abscisic acid regulation of gene expression during water-deficit stress in the era of the Arabidopsis genome
    Bray, EA
    PLANT CELL AND ENVIRONMENT, 2002, 25 (02): : 153 - 161
  • [9] Microarray data analysis reveals differentially expressed genes in prolactinoma
    Zhou, W.
    Ma, C.
    Yan, Z.
    NEOPLASMA, 2015, 62 (01) : 53 - 60
  • [10] Analysis of differentially expressed genes based on microarray data of glioma
    Jiang, Chun-Ming
    Wang, Xiao-Hua
    Shu, Jin
    Yang, Wei-Xia
    Fu, Ping
    Zhuang, Li-Li
    Zhou, Guo-Ping
    INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL MEDICINE, 2015, 8 (10): : 17321 - 17332