MyoD-induced circular RNA CDR1as promotes myogenic differentiation of skeletal muscle satellite cells

被引:76
作者
Li, Li [1 ]
Chen, Yuan [1 ]
Nie, Lu [1 ]
Ding, Xue [1 ]
Zhang, Xiao [1 ]
Zhao, Wei [1 ]
Xu, Xiaoli [1 ]
Kyei, Bismark [1 ]
Dai, Dinghui [1 ]
Zhan, Siyuan [1 ]
Guo, Jiazhong [1 ]
Zhong, Tao [1 ]
Wang, Linjie [1 ]
Zhang, Hongping [1 ]
机构
[1] Sichuan Agr Univ, Coll Anim Sci & Technol, 211 Huimin Rd, Chengdu 611130, Sichuan, Peoples R China
来源
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS | 2019年 / 1862卷 / 08期
基金
中国国家自然科学基金;
关键词
CDR1; as; Myogenesis; Myogenic differentiation protein 1; Insulin like growth factor 1 receptor; microRNA; 7; Skeletal muscle satellite cell; GENE REGULATORY NETWORKS; LONG NONCODING RNA; EXPRESSION; MICRORNA; BIOGENESIS; PREDICTION; PROFILES; RECEPTOR; DATABASE; MIR-7;
D O I
10.1016/j.bbagrm.2019.07.001
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Many protein coding and non-coding genes interplay in governing skeletal muscle formation. Nevertheless, comparing with the linear transcripts, functions of covalently closed circular RNAs (circRNAs), the new frontier of regulatory non-coding RNA (ncRNAs) molecules, remain largely unknown. Here, we identify CDR1as (antisense to the cerebellar degeneration-related protein 1 transcript, also termed as ciRS-7), a well-known cancer and neuron circRNA, plays a significant role in virtually controlling muscle differentiation. CDR1as is highly expressed in muscles of the mid-embryonic goat foetus, and activated at the initiation of myogenic differentiation in vitro. MyoD (myogenic differentiation protein 1), a driven transcription factor for myogenesis, promotes CDR1as by binding on its 5' flank region (- 646 to -634 bp, neighbouring the predicted transcription start site at - 580 bp). Overexpression or knockdown of CDR1as dramatically induces or impedes muscle differentiation program, respectively. By competitively binding to miR-7 (microRNA 7), CDR1as relieves the downregulation of IGF1R (insulin like growth factor 1 receptor) caused by miR-7 and consequently activates muscle differentiation. These results unveil that CDR1as plays critical roles in myogenic differentiation, which extends the versatile functions of CDR1as in mammal development and disease.
引用
收藏
页码:807 / 821
页数:15
相关论文
共 72 条
[1]   Circular RNAs in monkey muscle: age-dependent changes [J].
Abdelmohsen, Kotb ;
Panda, Amaresh C. ;
De, Supriyo ;
Grammatikakis, Ioannis ;
Kim, Jiyoung ;
Ding, Jun ;
Noh, Ji Heon ;
Kim, Kyoung Mi ;
Mattison, Julie A. ;
de Cabo, Rafael ;
Gorospe, Myriam .
AGING-US, 2015, 7 (11) :903-910
[2]   Predicting effective microRNA target sites in mammalian mRNAs [J].
Agarwal, Vikram ;
Bell, George W. ;
Nam, Jin-Wu ;
Bartel, David P. .
ELIFE, 2015, 4
[3]   circRNA Biogenesis Competes with Pre-mRNA Splicing [J].
Ashwal-Fluss, Reut ;
Meyer, Markus ;
Pamudurti, Nagarjuna Reddy ;
Ivanov, Andranik ;
Bartok, Osnat ;
Hanan, Mor ;
Evantal, Naveh ;
Memczak, Sebastian ;
Rajewsky, Nikolaus ;
Kadener, Sebastian .
MOLECULAR CELL, 2014, 56 (01) :55-66
[4]   ciRS-7 exonic sequence is embedded in a long non-coding RNA locus [J].
Barrett, Steven P. ;
Parker, Kevin R. ;
Horn, Caroline ;
Mata, Miguel ;
Salzman, Julia .
PLOS GENETICS, 2017, 13 (12)
[5]   MyoD and the transcriptional control of myogenesis [J].
Berkes, CA ;
Tapscott, SJ .
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 2005, 16 (4-5) :585-595
[6]   A circular twist on microRNA regulation [J].
Bezzi, Marco ;
Guarnerio, Jlenia ;
Pandolfi, Pier Paolo .
CELL RESEARCH, 2017, 27 (12) :1401-1402
[7]   Gene regulatory networks and cell lineages that underlie the formation of skeletal muscle [J].
Buckingham, Margaret .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (23) :5830-5837
[8]   Gene Regulatory Networks and Transcriptional Mechanisms that Control Myogenesis [J].
Buckingham, Margaret ;
Rigby, Peter W. J. .
DEVELOPMENTAL CELL, 2014, 28 (03) :225-238
[9]   A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA [J].
Cesana, Marcella ;
Cacchiarelli, Davide ;
Legnini, Ivano ;
Santini, Tiziana ;
Sthandier, Olga ;
Chinappi, Mauro ;
Tramontano, Anna ;
Bozzoni, Irene .
CELL, 2011, 147 (02) :358-369
[10]   Expression of circular RNAs during C2C12 myoblast differentiation and prediction of coding potential based on the number of open reading frames and N6-methyladenosine motifs [J].
Chen, Rui ;
Jiang, Ting ;
Lei, Si ;
She, Yanling ;
Shi, Huacai ;
Zhou, Shanyao ;
Ou, Jun ;
Liu, Yulin .
CELL CYCLE, 2018, 17 (14) :1832-1845